Volume 219, number 1, 45-50
FEB 04856
July 1987
Analysis of NMR spectra of sugar chains of glycolipids by 1D homonuclear Hartmann-Hahn and NOE experiments F. I n a g a k i , C. K o d a m a , M. Suzuki* a n d A. Suzuki* Department of Medical Chemistry and *Metabolism Section, The Tokyo Metropolitan Institute of Medical Science, 18-22 Honkomagome 3-chome, Bunkyo-ku, Tokyo 113, Japan
Received 19 March 1987 We applied 1D homonuclear Hartmann-Hahn (1D-HOHAHA) and difference NOE experiments to determine the chemical structure of Forssman's antigen, a glycolipid purified from sheep red blood cells. The subspectra corresponding to the individual sugar components were extracted from overlapping proton resonances by selective excitation of the anomeric proton resonances, so that unambiguous assignments of the sugar proton resonances were accomplished. Then, difference NOE experiments were performed to determine the linkage of the sugar units. The present procedure was found to be useful for the structure determination of glycoconjugates and also reduces the amount of samples and machine time. NMR; Forssman antigen; 1D homonuclear Hartmann-Hahn spectroscopy; Difference NOE; Coherence transfer
1. I N T R O D U C T I O N Glycolipids are components of cell membranes and are thought to play important roles in higher order cell functions, such as cell-cell recognition [1]. Clinically, glycolipids are useful as specific markers of tumour cells for diagnosis of cancers [2]. Since the biological functions of glycolipids are closely connected to the structure of the sugar moiety, efficient and nondestructive methods for the structure determination of the sugar moiety are indispensable. N M R is suitable for this purpose [3-5]. However, the main difficulty encountered in the analysis of N M R spectra of sugar moieties is the overlap of N M R resonances, so that N M R methods for extracting the proton resonances of each sugar residue f r o m the overlapping region are quite helpful. In the present study, we applied 1D homonuclear H a r t m a n n - H a h n experiments (1DCorrespondence address: F. Inagaki, Department of Medical Chemistry, The Tokyo Metropolitan Institute of Medical Science, 18-22 Honkomagome 3-chome, Bunkyo-ku, Tokyo 113, Japan
H O H A H A ) [6] to extract the subspectrum of each sugar component and then difference NOE experiments to determine the linkage of sugar residues of F o r s s m a n ' s antigen ( G a l N A c a l 3GalNAc~ 1-3Gala 1-4Gal~ 1-4Glqg 1-Cer).
2. E X P E R I M E N T A L Forssman's antigen was purified f r o m sheep red blood cells [7]. DMSO-d6 and 2H20 were purchased from CEA, and TMS from Merck. A 2 mg sample of F o r s s m a n ' s antigen was dissolved in mixed solvent of 400/zl DMSO-d6 and 100/zl 2H20 and incubated at 60°C for 10 min to replace exchangeable protons with deuterons. Then, the sample solution was lyophilized. The resulting residue was dissolved in 500/zl of freshly prepared DMSO-ds:EH20 (98:2, v/v) in 5 m m diameter N M R sample tubes. TMS was used as an internal reference of chemical shifts. N M R measurements were made on a Jeol GX-500 1H 500 M H z N M R spectrometer. 1 D - H O H A H A spectra were obtained at 60 ° and 40 ° using the pulse sequence of
Published by Elsevier Science Publishers B. V. (Biomedical Division) 00145793/87/$3.50 © 1987 Federation of European Biochemical Societies
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Davis and Bax [6]. RF field was attenuated to 4 W to avoid damage of the power amplifier and the probe. Offset frequency was set to the center of the sugar proton region (4.0 ppm). Long pulse (51 ms for 180 ° pulse) was used for selective excitation. Difference NOE spectra were obtained at 40 ° with alternating accumulation of on-resonance and offresonance irradiation. 3. RESULTS A N D D I S C U S S I O N Fig. la shows the 500 M H z 1H N M R spectrum of the lower field region of Forssman's antigen at 60 °. Except for the anomeric proton resonances (shown with asterisks), most of the sugar proton resonances overlap within the region from 3 to 4 ppm, which makes analysis of the N M R spectrum of glycolipids difficult. In the previous study [8], we have shown the usefulness of multiple relayed COSY and 2 D - H O H A H A experiments for extracting the subspectrum of each sugar residue by taking cross sections parallel to the F2 axis at the anomeric proton resonances. However, as an inherent drawback of 2D methods, these methods essentially require a large amount of machine time and samples. So, their application to the structural analysis of a small amount of glycolipids is not practical. The 1D method equivalent to 2DH O H A H A is more promising, where the subspectra of sugar residues can be obtained by selective excitation of the anomeric proton resonances (H 1). Fig. l b - e shows the dependence on mixing time of the subspectra of ce-galactose of Forssman's antigen obtained by 1 D - H O H A H A at 60 °. Efficiency of the coherence transfer depends on the magnitude of the vicinal coupling constants and the duration of the mixing time. With a short mixing time (fig.lb), the coherence of H1 transfers to H2 and H3 protons. U p o n increase in mixing time, the coherence transfers to H4 through H2 and H3 (fig. lc). However, the coherence transfer to H5 requires a much longer mixing time due to the small vicinal coupling constant between H4 and H5. With a mixing time longer than 200 ms, H5 proton resonance can be identified. Since hexose and hexosamine exist in the chair conformation, we can tune the mixing time a priori to the individual type of sugars. For example, we can extract all proton resonances of the B-glucose residue with a mixing time of 200 ms (fig.2f). The choice of mixing time 46
July 1987
depends on efficiency of the coherence transfer and decay of the coherence in the rotating frame. In the following experiment, we used 200 ms as the mixing time. Fig.2 shows the subspectra of the sugar residues of Forssman's antigen. Compared to the 2D methods, the spectral resolution by 1DH O H A H A is enough to resolve the spin-spin couplings of each resonance. From the analysis of the chemical shifts and splitting patterns, the type and the anomeric configuration of the individual sugar residues as well as the assignment of the proton resonances can be accomplished as is shown in fig.2. The time required for observing each subspectrum is about 6 min for 64 scans of onresonance and off-resonance irradiation. The total time required for the assignment of all sugar residues is less than 1 h. In contrast to the overnight accumulation for the measurement of multiple relayed COSY or 2 D - H O H A H A , IDH O H A H A significantly reduces the experimental time. Once the assignments of the proton resonances are made, the linkage of each sugar residue can be elucidated by difference N O E experiments. Fig.3 shows the difference NOE spectra of Forssman's antigen, where the anomeric proton resonances are selectively irradiated. Since the NOE effect was small and could not be detected at 60 °, NOE experiments were made at 40 °. Fig.3b shows the difference NOE spectrum where H1 of oe-galactose is selectively irradiated. With reference to the subspectra obtained by 1 D - H O H A H A , the NOE signals are readily assigned to H4 of B-galactose and H2 of ce-galactose, thus permitting the linkage of Galcel-4Galfl. Upon selective irradiation of H1 of B-N-acetylgalactosamine, the NOE effects are observed for H3 of o~-galactose and H3 and H5 of B-N-acetylgalactosamine (fig.3d). Subsequent irradiation on H1 of B-galactose gives interresidue NOE at H4 of B-glucose as well as intraresidue NOE (fig.3e). Thus, the sugar linkage of GalNAcBI-3Galoel-4Galfll-4GlcB1-Cer is confirmed with reference to the 1 D - H O H A H A and difference NOE spectra. However, upon irradiation of H 1 of cr-N-acetylgalactosamine, we observe NOE at H3 and H4 of B-N-acetylgalactosamine, suggesting the linkage of either GalNAco~I3GalNAcB or GalNAco~I-4GalNAcB. Model building of Forssman's antigen supports the dihedral angle around the sugar linkage of
Volume 219, number l
FEBS LETTERS
July 1987 +
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Volume 219, number 1
FEBS LETTERS
July 1987 +
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Volume 219, number 1
FEBS LETTERS
July 1987 +
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Volume 219, number 1
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GalNAca, I-3GalNAq6' being distorted due to steric hindrance so that H1 of cr-N-acetylgalactosamine is located in close proximity to H3 and H4 o f f l - N acetylgalactosamine. In spite of the difficulty encountered in the interpretation of the NOE difference spectrum, the present procedure is useful for structural analysis of the glycolipids in a non-empirical manner. ACKNOWLEDGEMENT We are grateful to The Naito Foundation for financial support.
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REFERENCES [1] Hakomori, S. (1981) Annu. Rev. Biochem. 50, 733-764. [2] Young, W.W. jr and Hakomori, S. (1981) Science 211,487-489. [3] Dabrowski, J., Egge, H. and Hanfland, P. (1980) Biochemistry 19, 5652-5658. [4] Koerner, T.A.W. jr, Prestegard, J.H., Demon, P.C. and Yu, R.K. (1983) Biochemistry 22, 2676-2687. [5] Koerner, T.A.W. jr, Prestegard, J.H., Demon, P.C. and Yu, R.K. (1983) Biochemistry 22, 2687-2690. [6] Davis, D.G. and Bax, A. (1985) J. Am. Chem. Soc. 107, 7197-7198. [7] Ando, S. and Yamakawa, T. (1970) Chem. Phys. Lipids 5, 91; Siddiqui, B. and Hakomori, S. (1971) J. Biol. Chem. 246, 5766-5769. [8] Inagaki, F., Kohda, D., Kodama, C. and Suzuki, A. (1987) FEBS Lett. 212, 91-97.