- Email: [email protected]
Author Index Vol. 276 (2001)
Gene 276 (2001) 175–176 www.elsevier.com/locate/gene
Author Index Vol. 276 (2001) Abe, T., see Kanaya, S. (276) 89 Bellizzi, D., Losso, M.A. and Sgaramella, V. A model for the involvement of Okazaki fragments maturation in the expansion of short tandem repeats (276) 153 Bernaola-Galva´n, P., see Oliver, J.L. (276) 47 Bernardi, G., Macaya, G. and Tomita, M. Foreword (276) 1 Bernardi, G. Misunderstandings about isochores: a review (276) 3 Bernardi, G., see Clay, O. (276) 15 Bernardi, G., see Clay, O. (276) 25 Bernardi, G., see Pavlı´cˇek, A. (276) 39 Blow, N.S., see Yokoyama, S. (276) 117 Bu¨nz, C., see Mu¨ller, W.E.G. (276) 161 Carels, N., see Clay, O. (276) 15 Carninci, P., see Sakai, H. (276) 101 Carpena, P., see Oliver, J.L. (276) 47 Clay, O., Carels, N., Douady, C., Macaya, G. and Bernardi, G. Compositional heterogeneity within and among isochores in mammalian genomes. I. CsCl and sequence analyses (276) 15 Clay, O. and Bernardi, G. Compositional heterogeneity within and among isochores in mammalian genomes. II. Some general comments (276) 25 Clay, O. Standard deviations and correlations of GC levels in DNA sequences (276) 33 Douady, C., see Clay, O. (276) 15 Gissi, C., see Pesole, G. (276) 73 Gojobori, T., see Suzuki, Y. (276) 83 Grebenjuk, V.A., see Mu¨ller, W.E.G. (276) 161 Grillo, G., see Pesole, G. (276) 73 Hayashizaki, Y., see Sakai, H. (276) 101 Hejnar, J., see Pavlı´cˇek, A. (276) 39 Ikemura, T., see Kanaya, S. (276) 89 Itoh, M., see Sakai, H. (276) 101
Kinouchi, M., see Kanaya, S. (276) 89 Konno, H., see Sakai, H. (276) 101 Kudo, Y., see Kanaya, S. (276) 89 Li, T.-H. and Schmid, C.W. Differential stress induction of individual Alu loci: implications for transcription and retrotransposition (276) 135 Li, W. Delineating relative homogeneous G+C domains in DNA sequences (276) 57 Licciulli, F., see Pesole, G. (276) 73 Liuni, S., see Pesole, G. (276) 73 Losso, M.A., see Bellizzi, D. (276) 153 Macaya, G., see Bernardi, G. (276) 1 Macaya, G., see Clay, O. (276) 15 Mignone, F., see Pesole, G. (276) 73 Mori, H., see Kanaya, S. (276) 89 Mu¨ller, I.M., see Mu¨ller, W.E.G. (276) 161 Mu¨ller, W.E.G., Schro¨der, H.C., Skorokhod, A., Bu¨nz, C., Mu¨ller, I.M. and Grebenjuk, V.A. Contribution of sponge genes to unravel the genome of the hypothetical ancestor of Metazoa (Urmetazoa) (276) 161 Nishi, T., see Kanaya, S. (276) 89 Ohno, H., Sakai, H., Washio, T. and Tomita, M. Preferential usage of some minor codons in bacteria (276) 107 Oliver, J.L., Bernaola-Galva´n, P., Carpena, P. and Roma´n-Rolda´n, R. Isochore chromosome maps of eukaryotic genomes (276) 47 Pacˇes, J., see Pavlı´cˇek, A. (276) 39 Pacˇes, V., see Pavlı´cˇek, A. (276) 39 Pavlı´cˇek, A., Jabbari, K., Pacˇes, J., Pacˇes, V., Hejnar, J. and Bernardi, G. Similar integration but different stability of Alus and LINEs in the human genome (276) 39 Pesole, G., Mignone, F., Gissi, C., Grillo, G., Licciulli, F. and Liuni, S. Structural and functional features of eukaryotic mRNA untranslated regions (276) 73 Roma´n-Rolda´n, R., see Oliver, J.L. (276) 47 Rubin, C.M., see Kim, C. (276) 127
Jabbari, K., see Pavlı´cˇek, A. (276) 39 Kanaya, S., Kinouchi, M., Abe, T., Kudo, Y., Yamada, Y., Nishi, T., Mori, H. and Ikemura, T. Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome (276) 89 Kawai, J., see Sakai, H. (276) 101 Kim, C., Rubin, C.M. and Schmid, C.W. Genome-wide chromatin remodeling modulates the Alu heat shock response (276) 127
Saito, R., see Sakai, H. (276) 101 Sakai, H., Washio, T., Saito, R., Shinagawa, A., Itoh, M., Shibata, K., Carninci, P., Konno, H., Kawai, J., Hayashizaki, Y. and Tomita, M. Correlation between sequence conservation of the 5 0 untranslated region and codon usage bias in Mus musculus genes (276) 101 Sakai, H., see Ohno, H. (276) 107 Schmid, C.W., see Kim, C. (276) 127 Schmid, C.W., see Li, T.-H. (276) 135 Schro¨der, H.C., see Mu¨ller, W.E.G. (276) 161 Sgaramella, V., see Bellizzi, D. (276) 153
0378-1119/01/$ - see front matter q 2001 Elsevier Science B.V. All rights reserved. PII: S 0378-111 9(01)00717-X
176
Author Index
Shibata, K., see Sakai, H. (276) 101 Shinagawa, A., see Sakai, H. (276) 101 Skorokhod, A., see Mu¨ ller, W.E.G. (276) 161 Suzuki, Y. and Gojobori, T. Positively selected amino acid sites in the entire coding region of hepatitis C virus subtype 1b (276) 83
Vinogradov, A.E. Within-intron correlation with base composition of adjacent exons in different genomes (276) 143
Tomita, M., see Bernardi, G. (276) 1 Tomita, M., see Sakai, H. (276) 101 Tomita, M., see Ohno, H. (276) 107
Yamada, Y., see Kanaya, S. (276) 89 Yokoyama, S. and Blow, N.S. Molecular evolution of the cone visual pigments in the pure rod-retina of the nocturnal gecko, Gekko gekko (276) 117
Washio, T., see Sakai, H. (276) 101 Washio, T., see Ohno, H. (276) 107
Author Index Vol. 276 (2001) Abe, T., see Kanaya, S. (276) 89 Bellizzi, D., Losso, M.A. and Sgaramella, V. A model for the involvement of Okazaki fragments maturation in the expansion of short tandem repeats (276) 153 Bernaola-Galva´n, P., see Oliver, J.L. (276) 47 Bernardi, G., Macaya, G. and Tomita, M. Foreword (276) 1 Bernardi, G. Misunderstandings about isochores: a review (276) 3 Bernardi, G., see Clay, O. (276) 15 Bernardi, G., see Clay, O. (276) 25 Bernardi, G., see Pavlı´cˇek, A. (276) 39 Blow, N.S., see Yokoyama, S. (276) 117 Bu¨nz, C., see Mu¨ller, W.E.G. (276) 161 Carels, N., see Clay, O. (276) 15 Carninci, P., see Sakai, H. (276) 101 Carpena, P., see Oliver, J.L. (276) 47 Clay, O., Carels, N., Douady, C., Macaya, G. and Bernardi, G. Compositional heterogeneity within and among isochores in mammalian genomes. I. CsCl and sequence analyses (276) 15 Clay, O. and Bernardi, G. Compositional heterogeneity within and among isochores in mammalian genomes. II. Some general comments (276) 25 Clay, O. Standard deviations and correlations of GC levels in DNA sequences (276) 33 Douady, C., see Clay, O. (276) 15 Gissi, C., see Pesole, G. (276) 73 Gojobori, T., see Suzuki, Y. (276) 83 Grebenjuk, V.A., see Mu¨ller, W.E.G. (276) 161 Grillo, G., see Pesole, G. (276) 73 Hayashizaki, Y., see Sakai, H. (276) 101 Hejnar, J., see Pavlı´cˇek, A. (276) 39 Ikemura, T., see Kanaya, S. (276) 89 Itoh, M., see Sakai, H. (276) 101
Kinouchi, M., see Kanaya, S. (276) 89 Konno, H., see Sakai, H. (276) 101 Kudo, Y., see Kanaya, S. (276) 89 Li, T.-H. and Schmid, C.W. Differential stress induction of individual Alu loci: implications for transcription and retrotransposition (276) 135 Li, W. Delineating relative homogeneous G+C domains in DNA sequences (276) 57 Licciulli, F., see Pesole, G. (276) 73 Liuni, S., see Pesole, G. (276) 73 Losso, M.A., see Bellizzi, D. (276) 153 Macaya, G., see Bernardi, G. (276) 1 Macaya, G., see Clay, O. (276) 15 Mignone, F., see Pesole, G. (276) 73 Mori, H., see Kanaya, S. (276) 89 Mu¨ller, I.M., see Mu¨ller, W.E.G. (276) 161 Mu¨ller, W.E.G., Schro¨der, H.C., Skorokhod, A., Bu¨nz, C., Mu¨ller, I.M. and Grebenjuk, V.A. Contribution of sponge genes to unravel the genome of the hypothetical ancestor of Metazoa (Urmetazoa) (276) 161 Nishi, T., see Kanaya, S. (276) 89 Ohno, H., Sakai, H., Washio, T. and Tomita, M. Preferential usage of some minor codons in bacteria (276) 107 Oliver, J.L., Bernaola-Galva´n, P., Carpena, P. and Roma´n-Rolda´n, R. Isochore chromosome maps of eukaryotic genomes (276) 47 Pacˇes, J., see Pavlı´cˇek, A. (276) 39 Pacˇes, V., see Pavlı´cˇek, A. (276) 39 Pavlı´cˇek, A., Jabbari, K., Pacˇes, J., Pacˇes, V., Hejnar, J. and Bernardi, G. Similar integration but different stability of Alus and LINEs in the human genome (276) 39 Pesole, G., Mignone, F., Gissi, C., Grillo, G., Licciulli, F. and Liuni, S. Structural and functional features of eukaryotic mRNA untranslated regions (276) 73 Roma´n-Rolda´n, R., see Oliver, J.L. (276) 47 Rubin, C.M., see Kim, C. (276) 127
Jabbari, K., see Pavlı´cˇek, A. (276) 39 Kanaya, S., Kinouchi, M., Abe, T., Kudo, Y., Yamada, Y., Nishi, T., Mori, H. and Ikemura, T. Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome (276) 89 Kawai, J., see Sakai, H. (276) 101 Kim, C., Rubin, C.M. and Schmid, C.W. Genome-wide chromatin remodeling modulates the Alu heat shock response (276) 127
Saito, R., see Sakai, H. (276) 101 Sakai, H., Washio, T., Saito, R., Shinagawa, A., Itoh, M., Shibata, K., Carninci, P., Konno, H., Kawai, J., Hayashizaki, Y. and Tomita, M. Correlation between sequence conservation of the 5 0 untranslated region and codon usage bias in Mus musculus genes (276) 101 Sakai, H., see Ohno, H. (276) 107 Schmid, C.W., see Kim, C. (276) 127 Schmid, C.W., see Li, T.-H. (276) 135 Schro¨der, H.C., see Mu¨ller, W.E.G. (276) 161 Sgaramella, V., see Bellizzi, D. (276) 153
0378-1119/01/$ - see front matter q 2001 Elsevier Science B.V. All rights reserved. PII: S 0378-111 9(01)00717-X
176
Author Index
Shibata, K., see Sakai, H. (276) 101 Shinagawa, A., see Sakai, H. (276) 101 Skorokhod, A., see Mu¨ ller, W.E.G. (276) 161 Suzuki, Y. and Gojobori, T. Positively selected amino acid sites in the entire coding region of hepatitis C virus subtype 1b (276) 83
Vinogradov, A.E. Within-intron correlation with base composition of adjacent exons in different genomes (276) 143
Tomita, M., see Bernardi, G. (276) 1 Tomita, M., see Sakai, H. (276) 101 Tomita, M., see Ohno, H. (276) 107
Yamada, Y., see Kanaya, S. (276) 89 Yokoyama, S. and Blow, N.S. Molecular evolution of the cone visual pigments in the pure rod-retina of the nocturnal gecko, Gekko gekko (276) 117
Washio, T., see Sakai, H. (276) 101 Washio, T., see Ohno, H. (276) 107