Characterization of compounds in unresolved complex mixtures (UCM) of a Mesoproterzoic shale by using GC×GC-TOFMS

Characterization of compounds in unresolved complex mixtures (UCM) of a Mesoproterzoic shale by using GC×GC-TOFMS

Accepted Manuscript Characterization of compounds in unresolved complex mixtures (UCM) of a Mesoproterzoic shale by using GC × GC – TOFMS Shuifu Li, J...

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Accepted Manuscript Characterization of compounds in unresolved complex mixtures (UCM) of a Mesoproterzoic shale by using GC × GC – TOFMS Shuifu Li, Jian Cao, Shouzhi Hu, Genming Luo PII:

S0264-8172(15)30040-4

DOI:

10.1016/j.marpetgeo.2015.07.019

Reference:

JMPG 2295

To appear in:

Marine and Petroleum Geology

Received Date: 28 May 2015 Revised Date:

28 June 2015

Accepted Date: 20 July 2015

Please cite this article as: Li, S., Cao, J., Hu, S., Luo, G., Characterization of compounds in unresolved complex mixtures (UCM) of a Mesoproterzoic shale by using GC × GC – TOFMS, Marine and Petroleum Geology (2015), doi: 10.1016/j.marpetgeo.2015.07.019. This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.

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Characterization of compounds in unresolved complex mixtures (UCM)

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of a Mesoproterzoic shale by using GC × GC – TOFMS

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Shuifu Lia*, Jian Caob*, Shouzhi Hua, Genming Luoc

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a. Key Laboratory of Tectonics and Petroleum Resources (China University of Geosciences, Wuhan), Ministry of Education, Wuhan, China 430074.

b. State Key Laboratory for Mineral Deposits Research, School of Earth Sciences and

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Engineering, Nanjing University, Nanjing 210023, China

c. State Key Laboratory of Biogeology and Environmental Geology, China University of

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Geosciences, Wuhan, China 430074.

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* Corresponding authors,

Shuifu Li. Tel: +8618986130262. Email: [email protected] Jian Cao. Email: [email protected].

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ABSTRACT Unresolved complex mixtures (UCM) in shales have important implications for organic matter

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formation and diagenesis. However, their origin is not well understood, one important reason for this is lacking the knowledge of their molecular compositions. Here, using the comprehensive two-dimensional gas chromatography (GC × GC) coupled with time-of-flight mass spectrometry (TOFMS), we conduct a pilot study based on a Mesoproterozoic black shale from North China.

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Detailed identification of compounds was made and a possible new origin was suggested.

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Results show that the separation of UCM hydrocarbons by a reversed-phase column system (polar/non-polar) is efficient for the identification of molecular composition of UCM. The UCM in the shale is composed mainly of C11–C27 compounds, including paraffin hydrocarbons, cycloalkanes and aromatics, in particular 1–3 cyclic paraffins with a short-chain alkyl group, multi-branched isoparaffins and their homologous series, which are indicative of isomerization

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of molecules intensively. This implies that the origin of the UCM might include the isomerization of organic molecules in addition to the commonly-thought microbial activities.

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shales.

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This study improves the understanding of the geochemical compositions and origin of UCM in

Keywords:

UCM; GC × GC – TOFMS; normal/reversed phase column systems; low- to middle-molecular-weight hydrocarbons; black shales; Mesoproterozoic Xiamaling Formation; North China

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1. Introduction Unresolved complex mixtures (UCM), refers to the “hump” in the conventional gas chromatogram (GC) of hydrocarbon fractions in soluble organic matter and is believed to be

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unresolved due to the complex and unknown molecular compositions ( Gough and Rowland, 1990; Killops and Al-Juboori, 1990; Gough et al., 1992). However, the UCM has significant geological/geochemical implications, e.g., for biodegradation as they are widely present when

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the organic matter was subjected to alteration ( Rubinstein et al., 1977; Ahsan et al., 1997; Huang et al., 2003; Korkmaz et al., 2013; Xiang et al., 2015). Therefore, the study of the UCM is critical

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in organic geochemistry and related geological studies, and is challenging due to the limitation of analytical advances.

Comprehensive two-dimensional gas chromatography (GC × GC) is a powerful analytical tool developed in the 1990s for separating complex mixtures (Liu and Phillips, 1991; Phillips

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and Beens, 1999; Mao et al., 2009). When coupled with time-of-flight mass spectrometry (TOFMS), which is a total-ion-scanning analytical technique with increased sensitivity and higher acquisition rates than quadrupole mass spectrometry (Wang et al., 2014), the method can

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be used to effectively separate and identify individual compounds with high resolution and thus is one of the analytical highlights in organic geochemistry during recent years ( Adahchour et al.,

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2006; von Mühlen et al., 2006; Li et al., 2008). Therefore, the GC × GC – TOFMS provides a possible means to characterize the molecular composition of UCM. For example, Ventura et al. (2008) satisfactory separated the UCM extracted from Late Archean sediments. However, the analysis was conducted only under a normal (non-polar/polar) phase column system without the reversed (polar/non-polar) phase column system. This compressed the aliphatic compounds in the sediments into a narrow

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extension on the second polar column, and thus resulted in a relatively ineffective use of the second dimensional retention space. Tran et al. (2010) analyzed biodegraded oils using a reversed column configuration, and obtained better resolution of the aliphatic compounds than

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under the normal column phase system; these compounds constitute the bulk of UCM. However, little detailed identification of compounds has been performed as their research focus was not the

issues is detailed identification of the compounds in UCM.

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identification. Therefore, the study of UCM in organic matters is still challenging. One of the key

Here, to further improve the understanding of this issue, as UCM is widely present in shales,

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we conducted a case study of a Mesoproterozoic shale collected in North China by using GC × GC – TOFMS. The reason for the sample selection is both scientifically and industrially. Scientifically, the shale sequences have been believed to be rare as they are still relatively low-mature (oil window) with old age (Precambrian), and thus have important scientific

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implications. Industrially, the shales are potential hydrocarbon source rocks and thus have critical significance for the hydrocarbon exploration in the Proterozoic of North China (Xie et al., 2013). Both the normal and the reversed phase column systems of GC × GC – TOFMS were used for

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comparison. Detailed identification of compounds was performed. Based on the geochemical results, we further address the origin of the UCM in the black shale. This can add to the

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understanding of the basic scientific issue of the origin of the UCM.

2. Sample and methods 2.1. Sample

The black shale sample in this study was collected from the Mesoproterozoic Xiamaling Formation. The sampling point is at the Zhaojiashan outcrop section in Huailai County, North

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China (N: 40°28'38.92'', E: 115°23'19.8'', H: 881 m). This set of black shales, as of scientific and industrial significance, has received much research attention (Wang and Simoneit, 1995; Gao et al., 2008; Xie et al., 2013). UCM were commonly identified in the shales, but its composition

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and origin have not been sufficiently known (Luo et al., 2015). The total organic carbon (TOC) content and δ13Corg of the shale sample are 3.37 wt.% and -34.1‰ relative to PDB, respectively. 2.2. Methods

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2.2.1. Extraction and separation

As the sample was collected from an outcrop section, to minimize the effects of surface

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weathering and recent contamination, weathered surface material on the sample was totally removed by cutting and the sample was thoroughly cleaned using distilled water. Then, the shale sample was finely powdered and then Soxhlet extracted with dichloromethane for 72 h, and subsequently separated into hydrocarbons and NSO fractions by an activated silica gel column

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(120 °C overnight). The saturated fraction was collected using n-hexane as an eluent (Li et al., 2012). Finally, the saturated fraction was rotary evaporated and then dried under a continuous low flow of N2.

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2.2.2. Gas chromatography- mass spectrometry (GC-MS)

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The saturated fraction was analyzed with a full scan mode (m/z 50−550) using an Agilent 6890N gas chromatograph coupled with 5973 mass spectrum (GC-MS). The GC was fitted with a DB-5MS capillary column (60 m × 0.25 mm × 0.25 µm). The sample was injected in splitless mode of an injector temperature of 310°C. The GC oven temperature program was held at 70 °C for 0.5 min and increased to 300 °C at 3 °C/min and held isothermally for 30 min. 2.2.3. GC × GC - TOFMS The GC × GC system consists of an Agilent 7890 gas chromatograph and cold/hot double 5

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vent modulator, equipped with Agilent autosampler. The time-of-flight mass spectrometer is a Pegasus 4D (Leco Corp., U.S.), and the software is ChromaTOF (Leco Corp., U.S.). The GC × GC column set in normal and reversed phase systems follows that of Li et al.

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(2012). Briefly, the primary GC oven for the normal phase system was programmed from 80 °C (0.2 min) to 300 °C (15 min) at 2.0 °C/min, and from 100 °C (2 min) to 300 °C (7 min) at

1.5 °C/min for the reversed-phase system. The secondary oven temperature program was 5 °C

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higher than that of the primary oven . The modulator temperature was 30 °C above the

temperature of the primary GC oven temperature for both the two column sets. The modulation

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period for the normal system was 6 s, with a 1.3 s hot pulse, and was 7.0 s with a 2.0 s hot pulse for the reversed-phase column system. The inlet temperatures for the normal and reversed column sets were 310 °C and 300 °C, respectively. Helium was the carrier gas at a flow rate of 1.5 ml/min and 1.0 ml/min for the normal and reversed column systems, respectively. The

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transfer line temperature to the mass spectrometer is 280 °C.

The ionization voltage and the detector voltage were set to 70 eV and 1475 V, respectively, and the TOF ion source temperature was 240 °C. The mass spectrum acquisition frequency of

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TOFMS was 100 spectra/s, and the mass range for acquisition was m/z 55−550. Chroma TOF Version 4.33 was used for data analysis and only peaks with S/N > 500 were

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characterized. Peak identification was performed using mass spectral library NIST05 and by the comparison of mass spectra and retention time in literatures (Wang, 1993).

3. Results and discussion

3.1. General geochemical characteristics of UCM in the total ion chromatogram (TIC) GC–MS analysis of the saturated fraction of the black shale sample displays a big UCM

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hump with low-molecular-weight compounds C11 to C17 in the TIC (Figure 1). The position of this distinct UCM spans in the range of n-C11–n-C27, and the constituents forming the UCM were not resolved by GC–MS.

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In contrast, the separation and identification of these unresolved mixtures have increased a lot by the analysis of GC × GC–TOFMS, especially under the reversed column system (Figures 2 and 3). In the TIC using the normal-phase column system (Figure 2), monocyclic, bicyclic and

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tricyclic alkylcycloalkanes of low- to middle-molecular-weight (the main part of the saturated hydrocarbon fraction of the UCM) could hardly be distinguished as they co-elute to form a

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hump.

Comparatively, in the TIC analyzed by the reversed-phase column system (Figure 3), similar to the results obtained under the normal-phase column system, tetracyclo-alkanes or alkanes with more rings co-elute with monocyclic aromatics on the high-molecular-weight end to

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a certain extent. However, the reversed-phase column system provides improved resolution of individual saturated hydrocarbons. Although the range of first-dimensional rention time with reversed-phase column system is smaller than that of normal-phase column system, the elution

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on the second-dimensional column by the reversed-phase column system are substantially longer than that using the normal-phase column system (Figures 2 and 3). This is demonstrated by the

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second-dimensional position of non-polar compounds, such as normal alkanes (< n-C23), which occurs from 1.39 s to 6.68 s retention time of the second-dimensional column (Figure 3). This greater time range increases the separation and resolution of low- to middle-molecular-weight compounds in the reversed-phase column system. In summary, the reversed-phase column system improves the separation and identification of low- to middle-molecular-weight hydrocarbons.

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3.2. Detailed geochemical characterization of compounds in UCM Based on the above results, it appears that the reversed-phase column system has special advantages in analyzing the UCM by GC × GC – TOFMS. As such, we undertake the analysis by

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the reversed-phase system with continuous extraction from m/z 185 to m/z 198 (Figures 4 and 5), to obtain a detailed identification of compounds in the UCM. These fourteen different ions are consistent with the mass of CH2 (14) and include m/z 191, and can reduce the signal interference

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of normal alkanes.

Results show that the morphological characteristics of a UCM extracted using different

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fragment ions varies markedly and the saturated and aromatic hydrocarbons appear concurrently after m/z 189. As the size of the fragment ions increases, the aromatics showing on the contour plot do not change notably, yet different types of saturated hydrocarbons can be observed for different ions (Figure 4). Ion chromatograms show that m/z 189, m/z 191 and m/z 193 are most

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distinguishable for the tricyclic, bicyclic and monocyclic alkanes, respectively. This implies that a relatively large number of UCM hydrocarbon monomers can be isolated and identified. The chromatography – mass spectrometry lattice spectrum obtained using m/z 191 shows that the

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UCM is composed of three clearly separated regions: region a primarily containing bicyclic alkanes, region b primarily containing monocyclic alkyl benzene and bicyclic aromatic

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naphthenes, and region c primarily containing bicyclic and tricyclic aromatics and polycyclic alkyl aromatic hydrocarbons as well as some sulfur-containing compounds and oxygen-containing compounds (Figure 5). The UCM consists mainly of C11–C27 hydrocarbons including alkanes (straight-chain and branched with very low contents comparable to the other compounds), cycloalkanes and aromatic naphthenes (monocyclic, bicyclic), aromatics (monocyclic benzene, bicyclic

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naphthalene and biphenyl, and their homologues), and other compounds. To compare individual compounds in the analyzed UCM by normal- and reversed-phase column systems, m/z 113, m/z 84 and m/z 137 were used to extract paraffin hydrocarbons,

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monocyclic alkanes and bicyclic alkanes, respectively. This can avoid the influence of other fragment ions. Results show the differences in the one-dimensional and second-dimensional retention time among the corresponding C12–C14 compounds (Figure 6, A & B inside the red box)

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between the reversed- and normal-phase column systems. This illustrates the advantages of the reversed-phase column system in the separation of isoalkanes and cycloalkanes of low- to

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middle-molecular-weight, which help to understand the isomerization of UCM (see section 3.4). In the range of C12–C14, eight compounds were identified: 2-ethyldecahydro-naphthalene, hexylcyclohexane, 1-ethyldecahydro-naphthalene, tridecane, 2-propyldecahydro-naphthalene, 1-propyldecahydro-naphthalene, heptylcycohexane and tetradecane (Table 1). As illustrated in

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Figure 6 (A & B), due to the difference in the polarity of the one-dimensional column, the peak elution order using the reversed-phase column system is different from that using the normal-phase column system (mass spectra of each compound in Figure 6 A and 6B as shown in

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Figures 7 and 8, respectively). Using the normal-phase column system, some alkyl decalin compounds cannot be separated well; for example, compounds e and f elute together. However,

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these two compounds are well separated under the reverse-phase column system, and their peak shapes are much better compared to that under the normal-phase column system. Table 1 shows the maximum differences in the one-dimensional and second-dimensional retention time between compounds a, b, c and d. In the normal-phase column system, the maximum difference in the first-dimensional retention time is only 54 s whereas that in the reversed-phase column system is 105 s (nearly double). Similarly, the maximum difference in the

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first-dimensional retention time using the normal-phase column system is only 0.21 s, whereas it is 1.12 s in the reverse-phase column system, a nearly six-fold difference. To examine the retention time of two compounds f and h (f: bicyclic alkanes, h: paraffin

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hydrocarbons) in the normal- and reversed-phase column systems, the differences in their

first-dimensional retention time are 54 s and 14 s, respectively. Moreover, the differences in the

column systems, respectively, showing a large discrepancy.

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second-dimensional retention time are 0.27 s and 1.32 s for the normal- and reverse-phase

As the carbon number of the compounds increases, the differences in the

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second-dimensional retention time increase in the reverse-phase column system. The difference between the retention time of compounds c and d is not as large as that between compounds f and h. In addition, data on the TIC reveal that the range of the second-dimensional retention time across the main body of UCM using the normal-phase column system is only 2.71 s and is 5.29 s

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using the reverse-phase column system (Figures 2 and 3). Therefore, the reverse-phase column system is especially efficient in the separation of saturated hydrocarbons with low or no polarity. This advantage has been widely shown and discussed in previous research (Li et al., 2015b). The

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results of this study provide a new case.

3.3. Advantage of reversed-phase column system to analyze UCM using GC × GC –

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TOFMS

Based on the results of this study, it is showed that the reversed-phase column system is superior to the normal-phase column system in the separation of UCM components using GC × GC – TOFMS, especially those low- to middle-molecular-weight compounds (Figures 2 and 3). This advantage has been widely shown in previous research (Li et al., 2015b). The results of this study provide a new case.

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As universally known, the GC × GC – TOFMS method has two experimental systems including normal (non-polar/polar) and reversed (polar/non-polar) ones (Adahchour et al., 2004; Tran et al., 2006; Hu et al., 2014). Considering that the vast majority of hydrocarbons in organic

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matter (especially normal to light crude oil) are non-polar or weakly polar (Peters et al., 2005a), the normal-phase column system has been commonly used with the first column being non-polar, while the reversed-phase column system has received relatively less attention (Ventura et al.,

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2011; Oliveira et al., 2012a; Ventura et al., 2012; Soares et al., 2013; Zhu et al., 2013). Analytical results show that the separation capacity of normal-phase columns becomes superior as the

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molecular weight and polarity of the hydrocarbons increase, and the retention time in the second column increases nearly exponentially (Silva et al., 2011; Oliveira et al., 2012b; Casilli et al., 2014; Kiepper et al., 2014). Therefore, in the GC × GC – TOFMS analysis the normal-phase column system is quite effective for the separation of hydrocarbons with high molecular weights

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and certain polarities.

However, the normal-phase column system is far less efficient for the separation of non-polar hydrocarbons than polar compounds because the second column is polar in nature; this

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is especially true for non-polar compounds of low- to middle-molecular-weight such as paraffin hydrocarbons, iso-paraffins, naphthenes and bicyclic alkanes (Tran et al., 2006; Tran et al., 2010;

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Hu et al., 2014). These compounds are crucial to the understanding of the geochemistry of organic matter. To complement this, the reversed-phase column system has attracted more and more attention. As the second-dimensional column of the system is non-polar, it can improve the resolution and increase the use of the second-dimensional separation space for the non-polar compounds (Tran et al., 2006; Hu et al., 2014). As a consequence, the reversed-phase column system is expected to effectively separate low- to middle-molecular-weight hydrocarbons that

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have small differences in polarity. For example, Tran et al. (2010) used the reversed-phase column system to analyze UCM in crude oils and achieved satisfactory separation results, illustrating the advantage and latest advance of this approach. This was further shown in this

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study. The reversed-phase column system is of particular significance in the separation and identification of low- to middle-molecular-weight hydrocarbons (Figures 2 and 3). 3.4. Origin of UCM

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The UCM has been widely been observed in oils, pyrobitumens and reservoir/source rock

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extracts with important geological/geochemical implications (Gough et al., 1992; Frysinger et al., 2003; Peacock et al., 2007; Scarlett et al., 2007; Wu et al., 2012). UCM in oils, pyrobitumens and reservoir rock extracts is commonly ascribed to the biodegradation of oils (Gough et al., 1992; Peacock et al., 2007; Scarlett et al., 2007; Zhang et al., 2014), while in source rocks it is most

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likely related to microbial activities (Cao et al., 2008; Pawlowska et al., 2013; Craig et al., 2013). Thus, it seem that the UCM exists almost in all oils and rock extracts regardless biodegradation or not. Once n-alkanes dominate in compositions, the UCM is depressed; otherwise, it becomes

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eminent. Alternatively, Ventura et al. (2012) suggested an interesting mechanism for generation

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during the early stages of hydrothermal petroleum formation based on its occurrence. In this study, the sample is very unique. It has been exposed to surface for several hundred million years and the loss of n-alkanes in extracts can be caused by several possible reasons, including hydrocarbon loss, oxidation, biodegradation, microbial activity and hydrothermal impact. As for hydrocarbon loss and/or oxidation, the low-molecular-weight hydrocarbons tend to be lost in comparison with high-molecular-weight hydrocarbons (Peters et al., 2005b).

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However, abundant low-molecular-weight normal alkanes (n-C11 to n-C17) have been observed in this study (Figure 1). Thus, these possibilities for the formation of UCM in this study can be

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excluded. As for the hydrothermal impact, the bitumen commonly contains abundant low- and

high-molecular-weight n-alkanes (Simoneit et al., 2004; Ventura et al., 2008; Ventura et al.,

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2012). However, the distribution of n-alkanes in this study is dominated by n-C11 to n-C17 with

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the absence of high-molecular-weight n-alkanes (Figure 1). In addition, no hydrothermal evidence has been discovered from the shale sample (Luo et al., 2015). Thus, the possibility of hydrothermal impact on the formation of UCM in this study can be excluded. As for the biodegradation, there is two sub-possibilities: oil biodegradation and shale

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biodegradation. In terms of oil biodegradation, the shale in this study is not a reservoir rock and there are no oil contaminants (Luo et al., 2015). In addition, if this UCM was formed by migrated oils, such a big hump as in this study (Figure 1) would commonly coexist with

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25-horpanes (Larter et al., 2012; Li et al., 2015a). Furthermore, normal alkanes in the oil,

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especially low- and moderate-molecular-weight compounds would disappear prior to the presence of UCM during the oil biodegradation (Robson and Rowland, 1988). These characteristics indicative of oil biodegradation, however, have not been detected in the sample. Thus, the UCM in this shale could not be caused by biodegradation of migrated hydrocarbons. With respect to the shale biodegradation, it differs significantly from oil biodegradation in reservoir and 25-norhopanes are not necessarily involved and commonly related to microbial activities (Cao et al., 2008; Pawlowska et al., 2013). Under such conditions, compounds 13

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indicative of microbes should be detected, e.g., hopanes (Peters et al., 2005b). In this study, the chromatographic profile for the shale exhibits a coexistence of a significant UCM hump and

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n-alkanes (Figure 1), and steranes and hopanes exhibit no discernible peaks in conventional one-dimensional GC-MS chromatograms. However, hopanes ranging from C27 to C35 were

detected by GC-MS-MS (Luo et al., 2015), suggesting the presence of microbial activity. In

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addition, according to the compositions of normal alkane, hopanes, steranes and the compound

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specific carbon isotopic compositions of n-alkanes, bacteria were one primary biotic precursors (Luo et al., 2015). Thus, microbial activities in the shale during diagenisis seem to be one possible candidate for the occurrence of big UCM in this study (Blumenberg et al., 2012; Pawlowska et al., 2013).

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In addition, based on the GC × GC – TOFMS results gained in this study, we have another possible interpretation. In the studied shale, the aliphatic fraction of UCM consists mainly of 1–3 cyclic paraffins with short chain alkyl groups, multi-branched isoalkanes and their homologues,

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which are indicative of isomerization of molecules intensively. This implies that the significant

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UCM might be triggered by enhanced isomerization of all the organic molecules present over the burial of the shale rather than the direct result of microbial activities alone. This possible origin needs further investigation.

4. Conclusions Based on a case study of Mesoproterozoic Xiamaling black shale, sample from North China, we report the detailed geochemical compositions of the UCM present and propose a possible

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new origin, which needs more studies. A comparative study using both normal- and reversed-column systems of GC × GC – TOFMS shows that the reversed-column system has

low- to middle-molecular-weight compounds.

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unique advantages for the separation and compositional identification of the UCM, especially

The UCM in this study is composed mainly of C10–C25 hydrocarbons including paraffin hydrocarbons (straight chain and branched), cycloalkanes (monocyclic, bicyclic, tricyclic) and

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aromatic hydrocarbons (monocyclic benzene, bicyclic naphthalene and biphenyl series). The aliphatic fractions of the UCM consist mainly of 1–3 cyclic paraffins with short chain alkyl

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groups, multi-branched isoalkanes and their homologues.

The origin of the UCM in the studied sample might include the isomerization of organic molecules present over the burial of the Xiamaling shale besides the microbial activities.

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Acknowledgements

We thank Drs. Thomas Gentzis and Zhirong Zhang and the other two anonymous reviewers

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for their detailed reviews and comments, which help to improve the article. This study was jointly supported by the “973” project (Grant Nos. 2012CB214804 and 2014CB239105) and

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National Natural Science Foundation of China (Grant No. 41273052).

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chromatography

time-of-flight

mass

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for

the

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two-dimensional gas chromatography for the characterization of ultra-deep condensate from

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the Bohai Bay Basin, China. Organic Geochemistry 63, 8-17.

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Table and Figure Captions

from the Mesoproterozoic Xiamaling shale by GC × GC – TOFMS.

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Table 1. Retention time for C12 – C14 paraffin hydrocarbons, mono- and bicyclic alkanes detected

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Figure 1. TIC chromatogram of the extracted saturated fraction of the Mesoproterozoic

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Xiamaling shale analyzed by GC – MS.

Figure 2. GC × GC – TOFMS TIC chromatogram of UCM analyzed by the normal-phase column system.

column system.

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Figure 3. GC × GC – TOFMS TIC chromatogram of UCM analyzed by the reversed-phase

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Figure 4. Characteristics of UCM with different fragment ions analyzed by the GC × GC – TOFMS reversed-phase system (m/z 185 to 198). Abbreviations, Par: Paraffins; MAk:

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Monocyclic Alkanes; BAk: Bicyclic Alkanes; TAk: Tricyclic Alkanes; MAr: Monocyclic Aromatics; CAr: Cycloalkyl Aromatics; BAr: Bicyclic Aromatics.

Figure 5. Characterization of UCM by the GC × GC – TOFMS reversed-phase column system. (A) m/z 191 mass chromatogram. (B) Structures of individual compounds in UCM corresponding to circles a, b and c in Figure A.

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Figure 6. GC × GC – TOFMS summed mass chromatograms showing the paraffins, mono-cyclic and bicyclic alkanes of UCM. (A) Fragment ion m/z 113+84×3+137×5 by normal-phase column system. (B) Fragment ion m/z 113+84×3+137×5 by reversed-phase column system. Their mass

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spectra of individual compounds a, b, c, d, e, f, g, and h in Figures A and B are shown in Figures 7 and 8, respectively, and their names were identified and listed in Table 1.

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Figure 7. Mass spectra of compounds a, b, c, d, e, f, g and h in Figure 6A.

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Figure 8. Mass spectra of compounds a, b, c, d, e, f, g and h in Figure 6B.

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Table 1. Retention time for C12 – C14 paraffin hydrocarbons, mono-cyclic alkanes and bicyclic alkanes in the analysis of the Mesoproterozoic Xiamaling shale sample by GC × GC – TOFMS.

Normal-phase

Molecular Compound name

a

1082

2-Ethyldecahydro-Naphthalene

C12H22

166

1622, 1.780

b

1116

Hexylcyclohexane

C12H24

168

1646, 1.690

c

1145

1-Ethyldecahydro-Naphthalene

C12H22

166

1658, 1.830

d

1170

Tridecane

C13H28

184

1676, 1.520

1.830-1.520=0.31 s

e&f

1777

C13H24

180

1982, 1.840

Difference in the first-dimensional retention time between compounds f and h:

C13H26

182

2024, 1.750

2036-1982=54 s

weight

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2-Propyldecahydro-Naphthalene 1-Propyldecahydro-Naphthalene g

h

1887

Tetradecane

C14H30

Maximum difference in the first-dimensional retention time among the four compounds: 1676-1622=54 s

Maximum difference in the second-dimensional retention time among the four compounds:

198

2036, 1.570

Difference in the second-dimensional retention time between compounds f and h: 1.840-1.570=0.27 s

C12H24

168

741, 3.110

Tridecane

C13H28

184

783, 4.020

1029

2-Ethyldecahydro-Naphthalene

C12H22

166

804, 2.900

Maximum difference in the second-dimensional retention time among the four compounds:

c

1112

1-Ethyldecahydro-Naphthalene

C12H22

166

846, 2.940

4.020-2.900=1.12 s

g

1564

Heptylcycohexane

C13H26

182

1021, 3.810

e

1675

2-Propyldecahydro-Naphthalene

C13H24

180

1063, 3.520

h

1706

Tetradecane

C14H30

198

1077, 4.780

Difference in the second-dimensional retention time between compounds f and h:

f

1735

1-Propyldecahydro-Naphthalene

C13H24

180

1091, 3.460

4.780-3.460=1.32 s

889

d

997

a

Hexylcyclohexane

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b

column

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system

Heptylcycohexane

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Reversed-phase

1859

Difference in retention time

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Formula

column system

1st D & 2nd D time (s)

Peak No.

Label

SC

Type

Maximum difference in the first-dimensional retention time among the four compounds: 846-741=105 s

Difference in the first-dimensional retention time between compounds f and h: 1091-1077=14 s

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Figure 1 nC14

nC15

abundance

nC16 nC12

nC23 nC17 nC18nC19

nC25 nC27

TIC

nC21

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nC13

nC11

UCM

20.00

30.00

40.00

50.00

60.00

70.00

80.00

90.00

100.00

EP

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Time (min)

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10.00

SC

nC10

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Bicyclic Aromatics

Cycloalkyl Aromatics

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Figure 2

Monocyclic Aromatics UCM

Tricyclic Alkanes

Bicyclic Alkanes Monocyclic Alkanes Paraffins

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Naphthalene

29

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Figure 3

Paraffins

nC21

UCM

C20, m/z 82, WM=280

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Monocyclic Alkanes

Bicyclic Alkanes

C19

Tricyclic Alkanes

C 19

117 63 60

77

91 102

80

100

146

128 120

140

128 63

87 80

102 100

120

Bicyclic Aromatics

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60

74

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Monocyclic Aromatics

Cycloalkyl Aromatics

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Figure 4

Par

Par

MAk BAk TAk MAr CAr BAr

MAk BAk TAk MAr CAr BAr

Par MAk BAk TAk MAr CAr BAr

Par

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MAk BAk TAk MAr CAr BAr

Par

MAk BAk TAk MAr CAr BAr

Par

Par

MAk BAk TAk MAr CAr BAr

MAk BAk TAk MAr CAr BAr

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Par MAk BAk TAk MAr CAr BAr

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Par MAk BAk TAk MAr CAr BAr

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Par MAk BAk TAk MAr CAr BAr

Par

Par

MAk BAk TAk MAr CAr BAr

MAk BAk TAk MAr CAr BAr

Par

Par

MAk BAk TAk MAr CAr BAr

MAk BAk TAk MAr CAr BAr

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Par

MAk BAk TAk MAr CAr BAr

31

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Figure 5 79

67

109 135

100

150

100

200

150

149

247

191 200

100

250

150

191

247

177 200

290

211 240 100

250

150

200

C21 TT

C20 TT

A

81

123

95

149

220

150

81

123

95

191

300

191

95

68

250

123

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95

67

82

C19 TT

163

276

243

100

C18 TT

150

200

250

67

95

67

a

95

123

123 163

67 135 121 149

b 91 105

100

150

133

161

100

150

c

200

60

77 80

129

169

1000

155

190

91 105 65 77

100 120 140 160 180 200

a

60

80

143

190

100 120 140 160 180 200

b

82 97

130

183

100

150

150

200

262

250

226 213

200

63

89

115

100

195 179

252 223

143 150

200

250

c

AC C

EP

TE D

B

100

191 177 206

149

250

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65

200

206

119 147

191

SC

81

233 248

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Figure 6

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A Aromatic Hydrocarbon

b

138

d C13H28

C12H26

B

e f g h

C14H30

222

SC

c

a

208

C16H34

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152

194

180

166

C15H32

C17H36

C17H36

C18H38

C18H38

C16H34

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C15H32

C14H30

h

C13H28

d

208

194

b

ef

EP

C12H26

g

222

ac

Aromatic Hydrocarbon

AC C

166

180

152

138

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Figure 7 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1082 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1777 , at 1622 , 1.780 sec , sec , at 1982 , 1.840 sec , sec

a

67

e&f

81

1000

95

67

137

95

166

109

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81

1000

137

180

60 80 100 120 140 160 60 80 100 120 140 160 180 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1116 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1777 , at 1646 , 1.690 sec , sec , at 1982 , 1.840 sec , sec

b 67 168

67

e&f

81

1000

83

SC

1000

95

137

180

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60 80 100 120 140 160 60 80 100 120 140 160 180 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1145 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1859 , at 1658 , 1.830 sec , sec , at 2024 , 1.750 sec , sec

c

81

1000

67

g

1000

95

83

137

67

166

109 123

182

98

60 80 100 120 140 160 60 80 100 120 140 160 180 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1170 Peak True - sample "20110109-alk1-Sat-2D:1", peak 1887 , at 1676 , 1.520 sec , sec , at 2036 , 1.570 sec , sec 1000 71 85 98 112 80

100

120

h

1000 71 85 98 112

184

140

160

180

60

80

154

198

100 120 140 160 180 200

AC C

EP

60

TE D

d

34

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Figure 8

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Peak True - sample "20110104-alk1-2D:1", peak 889, at 7 Peak True - sample "20110104-alk1-2D:1", peak 1564, at 41 , 3.110 sec , sec 1021 , 3.810 sec , sec

g

b 1000

1000

83

83

67

69

168

98

97

125

154

182

d

1000

1000

81

137

M AN U

67

154

e

95

71 83 98 113

SC

60 80 100 120 140 160 60 80 100 120 140 160 180 Peak True - sample "20110104-alk1-2D:1", peak 997, at 7 Peak True - sample "20110104-alk1-2D:1", peak 1675, at 83 , 4.020 sec , sec 1063 , 3.520 sec , sec

184

180

123

60 80 100 120 140 160 180 60 80 100 120 140 160 180 Peak True - sample "20110104-alk1-2D:1", peak 1029, at Peak True - sample "20110104-alk1-2D:1", peak 1706, at 804 , 2.900 sec , sec 1077 , 4.780 sec , sec 81

1000

h

a

95

1000

67 137 110 123

71

166 151

85

99

126

198

155

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60 80 100 120 140 160 60 80 100 120 140 160 180 200 Peak True - sample "20110104-alk1-2D:1", peak 1112, at Peak True - sample "20110104-alk1-2D:1", peak 1735, at 1091 , 3.460 sec , sec 846 , 2.940 sec , sec

c

81

1000

95

67

137

EP

80

100

120

140

160

137 180

107 60

80

100

120

140

160

180

AC C

60

95

67

166

109 123

f

81

1000

35

ACCEPTED MANUSCRIPT Highlights: UCM present in the Mesoproterozoic Xiamaling shale, North China. Detailed C10–C25 compounds were identified in UCM by GC × GC - TOFMS.

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Results by reversed-phase column system are better than normal-phase column system.

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UCM was formed by isomerization of organic molecules besides microbial activities.