Chromosome analysis of human neuroblastoma cell line TR14 showing double minutes and an aberration involving chromosome 1

Chromosome analysis of human neuroblastoma cell line TR14 showing double minutes and an aberration involving chromosome 1

Chromosome Analysis of Human Neuroblastoma Cell Line TR14 Showing Double Minutes and an Aberration Involving Chromosome 1 John K. Cowell and H. Thomas...

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Chromosome Analysis of Human Neuroblastoma Cell Line TR14 Showing Double Minutes and an Aberration Involving Chromosome 1 John K. Cowell and H. Thomas Rupniak

ABSTRACT:

The chromosomal analysis of a human neuroblastoma cell line derived from a pediatric patient is presented. The cell line has a modal chromosome number of 64 and contains large numbers of double minutes (DMs). The DMs are stable over many passages in vitro. A consistent feature of the karyotype is an abnormality involving the short arm of chromosome 1, which is consistent with previous reports from human neuroblastomas. The region distal to band lp31 has homogeneously staining characteristics and as such this cell line represents a rare example where DMs and HSRs are constitutive features of the same cells. The possibility that such regions could arise from chromosome rearrangements is discussed.

INTRODUCTION The belief that specific c h r o m o s o m e aberrations m a y be involved in the p r e d i s p o sition to the d e v e l o p m e n t of cancer has been strongly s u p p o r t e d by the findings in several neoplasms of pediatric origin. In two cases the increased probability of tumor d e v e l o p m e n t has been correlated with the inheritance or spontaneous dev e l o p m e n t of small, specific c h r o m o s o m e deletions. The risk of d e v e l o p i n g retinoblastoma has been associated with the deletion of b a n d 13q14 [1] and the deletion of c h r o m o s o m e b a n d 11p13 greatly e n h a n c e d the chance of d e v e l o p i n g Wilms' tumor [2]. Neuroblastomas represent another relatively c o m m o n pediatric cancer w h i c h shows an inherited p r e d i s p o s i t i o n [3]. A c c u m u l a t e d evidence has revealed the association of three specific c h r o m o s o m e abnormalities: aberrations involving the short arm of c h r o m o s o m e 1, double minutes (DMs), and h o m o g e n e o u s l y staining regions (HSRs). Although DMs and HSRs have been reported in tumors from a variety of different cell types, neuroblastomas probably represent the most frequent example [4]. In this report we present the cytogenetic findings from h u m a n neuroblastoma cell line TR14, derived from a pediatric patient, w h i c h contains DMs and an aberration involving the short arm of c h r o m o s o m e 1 w h i c h is possibly an HSR.

From the Department of Haematologyand Oncology,Institute of Child Health, London (J.K.C.)and the Department of Cellular Chemotherapy, Imperial Cancer Research Fund, London. Address requests for reprints to John K. Cowell, Department of Haematology and Oncology, Institute of Child Health, 30 Guilford Street, London WC1, England. Received October 13, 1982; accepted December 1, 1982.

273 © Elsevier Science Publishing Co., Inc., 1983 52 Vanderbilt Ave., New York, NY 10017

Cancer Genetics and Cytogenetics 0165-4608/83/$03.00

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MATERIAL AND METHODS

Cells and Cell Culture The TR14 cell line was derived from biopsy material of a 3-year-old male with stage III disease who had previously been treated with chemotherapy--Vincristine, Cyclophosphamide, Adriamycin, Melphalan (high-dose)--and low-dose radiotherapy. The procedure for isolation of the cell line and the characteristics of the resultant cells have been presented in more detail elsewhere [5]. All ceils were grown in Hams F12 medium supplemented with 10% fetal calf serum and transferred and harvested with trypsin. Chromosome Preparations The cell cycle time of the TR14 cells was approximately 3 days which made it difficult to obtain large numbers of metaphases without excessive treatment with mitotic arresting agents which would cause chromosome contraction. A 2-hr vinblastine treatment proved to be the maximum acceptable, after which the cells were

Figure 1

Representative Giemsa-banded karyotype from the TR14 cell line showing three

copies of the abnormality on chromosome 1.

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harvested and chromosome preparations made using standard air drying techniques [6]. T r y p s i n - G i e s m a b a n d i n g was carried out according to a modified technique described previously [6]. RESULTS In this study 20 well-banded metaphases were analyzed, giving the modal chromosome n u m b e r in TR14 cells as 63 (54%), with a range of 60-64. Sporadic chromosome counts over a 12-month period showed this n u m b e r to be fairly constant during in vitro culture. A representative karyotype of the TR14 cell line is s h o w n in Figure 1. Chromosomal variation among cells could be accounted for by apparently r a n d o m losses and gains of i n d i v i d u a l chromosomes. A n HSR-like region was present on the short arm of chromosome 1 distal to band lp31 (Fig. 2) and the tip had acquired a heavy band. In the majority of cells there were at least two of these markers and sometimes three. Four other chromosome markers were present (Fig. 1), one of w h i c h - - m l - - i n v o l v e s the translocation of the long arm of chromosome 3 onto the long arm of chromosome 1 (Fig. 1) and as such was similar to a marker seen in HeLa cells [7]. The other three markers could not be positively identified. It was possible that the distal region of the chromosome 1 marker was not an HSR but had arisen as a result of chromosome rearrangement (see Discussion). The distal region of l p is normally weakly banded (Fig. 2) and a rearrangement may

Figure 2 (Top) The homogeneously staining region on the short arm of chromosome 1 in TR14. (Bottom) A normal chromosome 1 (left) is compared with the abnormal 1 (right) and illustrates how the homogeneously staining region (HSR) might have arisen from the translocation of an unidentified chromosome region to the tip of the short arm of chromosome 1. A suggested breakpoint is indicated by the arrow.

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J.K. Cowell et al. involve the relocation of an unidentified region to the tip of l p with a breakpoint in lp36. The presence of the distal heavy band suggests that some translocation had occurred although the identity of the material could not be determined.

Double Minutes In the TR14 cell line there were often i n n u m e r a b l e double minutes (Fig. 3, 4) in every cell. T y p i c a l l y they varied in n u m b e r from cell to cell, sometimes c o m p l e t e l y covering the c h r o m o s o m e s (Fig. 3). Karyotypes m a d e 12 months apart i n d i c a t e d that the DMs have persisted in the cultured cells for at least this period of time. Not only was there heterogeneity in DM n u m b e r but size heterogeneity between DMs was also noted in the same cell (Fig. 5). The size of DMs in the TR14 cell line varied from the limits of resolution to relatively large DMs (Fig. 5). The presence of DMs and the HSR-like region in l p was noted in all cells. DISCUSSION The short arm of c h r o m o s o m e 1 is frequently involved in c h r o m o s o m e abnormalities in both neuroblastoma tissue and in cell lines derived from t h e m [8]. Consistent with this general finding, neuroblastoma cell line TR14 also has an aberration involving the short arm of chromosome 1. Deletion of most or part of the short arm has been the most consistent finding [8-11], the deleted region in c o m m o n to t h e m all being that distal to band lp32. In one of these cases this deletion represented the only c h r o m o s o m e abnormality in the cell [9]. In some cases where there was a p p a r e n t l y no deletion of chromosomal material, the short arm of c h r o m o s o m e 1 could be either relocated in the genome [10], or be the recipient site for a translocation or insertion [8]. These findings further i m p l y that disturbance of the genetic material in the short arm of chromosome 1 m a y be important in the d e v e l o p m e n t of neuroblastoma. Many neuroblastomas are n e a r - d i p l o i d [8]; TR14 however was subtetraploid, p r e s u m a b l y as a result of tetraploid formation and c h r o m o s o m e loss, a feature of some other established neuroblastoma cell lines [12]. The presence of two or more copies of the abnormal c h r o m o s o m e 1 suggests that this a b n o r m a l i t y was present in the cell line before endoreduplication, in contrast to the other c h r o m o s o m e markers in TR14 w h i c h were only present in single copy. Other c h r o m o s o m e abnormalities found frequently in neuroblastomas are HSRs [10] where they have been shown to be associated with m a n y different chromosomes. W h e n the HSR was located on c h r o m o s o m e 1 its position was variable, although in one case (IMR 32) it was located w i t h i n the frequently deleted 1p32ter region [11]. In TR14 the aberrant c h r o m o s o m e 1 was cytologically similar to that reported in IMR 32, an i n d e p e n d e n t l y derived cell line [14]. The same HSR w i t h a subterminal pale region and a distally located heavy b a n d was also observed in a retinoblastoma cell line [15]. There is now strong evidence that, in a few specific systems, HSRs represent gene amplification [16-18] and, by analogy, it is generally considered that all other HSRs also represent gene amplification [4]. Cytologically the subterminal region of chromosome 1 in TR14 is characteristic of an HSR but w h e t h e r it has arisen as a result of localized gene amplification or chromosome rearrangement is uncertain. One difficulty in distinguishing between these two possibilities lies in the fact that the l p 3 2 - t e r region is ordinarily faintly banded. Relocation of similar regions "back-to-back" could give the i m p r e s s i o n of an HSR. The presence of a distally located heavy band, not n o r m a l l y present on chromosome 1, further suggests that a rearrangement has occurred at some stage. Such a rearrangement possibly involves

Figure 3 Figure 4

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Giemsa-stained metaphase spread from TR14 showing large numbers of DMs with variable size. A cell from TR14 with fewer but more homogeneously sized DMs (arrows).

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Figure 5 Heterogeneity in DM size within a single cell from TR14. DMs vary from the limits of resolution to a size (arrows) approaching that of the smallest human chromosome.

one of the breakpoints in band l p 3 6 and is thus similar to that in a previous report by Brodeur et al. [9]. It was not possible in this case to determine whether there had been any deletion of chromosomal material during the evolution of the abnormal chromosome. The only detectable short arm material from chromosome 1 was present on the marker chromosome, which possibly makes any large deletion unlikely as this w o u l d represent complete loss of this material from the cell. The constitutive presence of DMs and HSRs in the same cell is rare [4] which is another reason to conclude that the u n b a n d e d region i n TR14 is not an HSR. A n alternative possibility is that two completely different genes have been amplified and in these cells the amplification has been mediated by DM and HSR formation, respectively. The TR14 cell line was not resistant to methotrexate and the identity of the amplified genes is not known. It is also completely u n k n o w n whether the amplified sequences are related to the malignancy of the cells. It may be that there are several different genes present in the DMs. The answers to these questions might be obtained from specific DM-DNA clones from TR14, which w o u l d be a suitable starting material because of the high n u m b e r of DMs per cell and their stability in the cells in vitro. Since neuroblastomas often contain DMs [10] an analysis of this type might prove useful in determining whether the same genes are being amplified in other h u m a n neuroblastomas.

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The frequent presence of DMs and HSRs in h u m a n neuroblastomas suggests that this tumor cell type shows a propensity for the genesis of amplified sequences [19]. Whether these genes are involved in m a l i g n a n c y of the cell is not known. It might be that they represent a genetic imbalance i n the cell responsible for the malignant phenotype. It was suggested by Sachs and co°workers [20, 21] that cancer might be due to chromosome imbalance, defined as a change in the relative dose of certain genes in malignant cells compared with the normal cell. Chromosome imbalance can possibly be generated in m a n y ways [22, 23] i n c l u d i n g deletions and duplications of whole or parts of chromosomes, tetraploid formation and chromosome loss [24, 25], and also from position effect due to chromosome rearrangement [22]. All of these chromosome abnormalities at one time or another have been described associated with chromosome 1 in neuroblastomas [8]. It is possible therefore that imbalance for the 1p32-ter region is important in the genesis of neuroblastoma. Theoretically imbalance can also be produced by specific amplification of the gene(s) relevant to m a l i g n a n c y by the formation of HSRs and DMs. In one particular cell line an HSR has been shown to be located w i t h i n the 1p32-ter region [13]. Since DMs are an alternative form of HSRs [4], it is tempting to speculate that the DMs may have arisen from the same l p region. A similar suggestion was made by Atkin and Baker [26]. In h u m a n cervical carcinomas there is often an excess of material from chromosome 1. In one such carcinoma this was not obviously the case but instead DMs were present, the suggestion being that they represented the extra material from chromosome 1. The availability of clones from the TR14 DMs could prove an important tool to test this hypothesis in neuroblastomas. We are particularly grateful to Dr. J. Pritchard for making available the original neuroblastoma biopsy material, and to Dr. L. M. Franks and Bridget T. Hill for their support and encouragement during the course of these studies.

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