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Contents of Volume 25
Journal of Clinical Virology 25 (2002) 361– 363 www.elsevier.com/locate/jcv
Contents of Volume 25 Number 1 —July 2002 Editorial B. Carman, W.L. Drew
1
Review The role of the virology laboratory in the management of hepatitis C virus infection W.L. Irving
3
Full length articles Treat or test first? Decision analysis of empirical antiviral treatment of influenza virus infection versus treatment based on rapid test results V. Sintchenko, G.L. Gilbert, E. Coiera, D. Dwyer Prevalence of tick-borne-encephalitis virus antibodies in Lithuania A. Juceviciene, O. Vapalahti, A. Laiskonis, J. C& eplikiene; , P. Leinikki Detection of late pp67-mRNA by NASBA in peripheral blood for the diagnosis of human cytomegalovirus disease in AIDS patients B.S.N. Blank, P.L. Meenhorst, W. Pauw, J.W. Mulder, W.C. van Dijk, P.H.M. Smits, F. Roeles, J.M. Middeldorp, J.M.A. Lange Prevalence of mutations related to HIV-1 antiretroviral resistance in Brazilian patients failing HAART A. Tanuri, E. Caridea, M.C. Dantas, M.G. Morgado, D.L.C. Mello, S. Borges, M. Tavares, S.B. Ferreira, G. Santoro -Lopes, C.R.F. Martins, A.L.C. Esteves, R.S. Diaz, S.M.S. Andreo, L.A.P. Ferreira, R. Rodrigues, T. Reuter, A.M.S. Cavalcanti, S.M. de Oliveira, H.B. de Barbosa, P.R. Teixeira, P.N. Chequer Effect of perinatal short-course zidovudine on the clinical and virological manifestations of HIV-1 subtype E infection in infants R. Sutthent, K. Chokephaibulkit, D. Piyasujabul, N. Vanprapa, A. Roogpisuthipong, P. Chaisilwatana Performance of an in-house genotypic antiretroviral resistance assay in patients pretreated with multiple human immunodeficiency virus type 1 protease and reverse transcriptase inhibitors C. Peduzzi, P. Pierotti, G. Venturi, L. Romano, F. Mazzotta, M. Zazzi The dynamics of mutations in the YMDD motif of the hepatitis B virus polymerase gene during and after lamivudine treatment as determined by reverse hybridisation S.D. Pas, R.A. de Man, E. Fries, A.D.M.E. Osterhaus, H.G.M. Niesters Guidelines and Clinical Algorithms Guidelines for laboratory monitoring of treatment of persistent virus infections D. Pillay, V.C. Emery, D. Mutimer, M.M. Ogilvie, W. Carman, K. Mutton, T. Wreghitt, D. Westmoreland, J. Breuer, M. Zuckerman, on behalf of the Public Health Laboratory Service (PHLS ) Advisory Committee on Virology My Favourite Reagent Detection of HBV DNA using real time analysis S.D. Pas, H.G.M. Niesters A nested primer set targeting the cytomegalovirus glycoprotein B gene P.V. Coyle, D.E. Wyatt, G.M. Ong, A.P. Maxwell, C. McCaughey, H.J. O ’Neill
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Contents of Volume 25
Number 2—August 2002 Reviews The virological and clinical significance of mutations in the overlapping envelope and polymerase genes of hepatitis B virus J. Torresi Paediatric HIV in 2002— a treatable and preventable infection E.G. Hermione Lyall Full length articles Methods in virus diagnosis: immunofluorescence revisited C.R. Madeley, J.S.M. Peiris Chronic human parvovirus B19 infection in rheumatic disease of childhood and adolescence H.W. Lehmann, L. Ku¨ hner, K. Beckenlehner, E. Mu¨ ller -Godeffroy, K.-G. Heide, R.-M. Ku¨ ster, S. Modrow A m-capture immunoassay for detection of human herpes virus-6 (HHV-6) IgM antibodies in human serum L. Nielsen, B.F. Vestergaard Rapid detection of enterovirus infection by automated RNA extraction and real-time fluorescence PCR H.F. Rabenau, A.M.K. Clarici, G. Mu¨ hlbauer, A. Berger, A. Vince, S. Muller, E. Daghofer, B.I. Santner, E. Marth, H.H. Kessler Novel mutations in the thymidine kinase and DNA polymerase genes of acyclovir and foscarnet resistant herpes simplex viruses infecting an immunocompromised patient D. Chibo, A. Mijch, R. Doherty, C. Birch The value of polymerase chain reaction for the diagnosis of viral respiratory tract infections in lung transplant recipients A. Weinberg, M.R. Zamora, S. Li, F. Torres, T.N. Hodges Human papillomavirus DNA testing by PCR-ELISA and hybrid capture II from a single cytological specimen: concordance and correlation with cytological results S. Venturoli, M. Cricca, F. Bonvicini, F. Giosa, F.R. Pulvirenti, C. Galli, M. Musiani, M. Zerbini Hepatitis G virus genotypes in a tertiary care centre in southern India P. Abraham, R. Hallett, S. Radhakrishnan, S. Raghuraman, G. Sridharan, C.G. Teo Encephalomyelitis due to human parechovirus type 1 V. Legay, J.J. Chomel, B. Lina, M. Aymard, S. Khalfan Identification of viral agents causing gastroenteritis among children in Buenos Aires, Argentina A. Bereciartu, K. Bok, J. Go´ mez Multicenter evaluation of the Bayer VERSANT™ HIV-1 RNA 3.0 assay: analytical and clinical performance C.A. Gleaves, J. Welle, M. Campbell, T. Elbeik, V. Ng, P.E. Taylor, K. Kuramoto, S. Aceituno, E. Lewalski, B. Joppa, L. Sawyer, C. Schaper, D. McNairn, T. Quinn Presence of parvovirus B19 DNA in chronic urticaric and healthy human skin T. Vuorinen, K. Lammintausta, P. Kotilainen, S. Nikkari Detection of human parvovirus B19 infection: a study of 212 suspected cases in the state of Rio de Janeiro, Brazil M.C.M.W. Wermelinger, W.M.R. Oelemann, M.C. Lima de Mendonc¸ a, F.G. Naveca, M.G. von Hubinger My Favourite Reagent Norwalk like virus by light cycler PCR I. Miller, R. Gunson, W.F. Carman Rational optimization of generic primers used for Norwalk-like virus detection by reverse transcriptase polymerase chain reaction H. Vennema, E. de Bruin, M. Koopmans Correspondence ‘An atypical pattern of HCV INNO-LiPA™ subtype’ G. Matera, G.S. Barreca, A.G. Lamberti, A. Quirino, D. Foca`, M.C. Liberto Re: RT-PCR based analysis of enteroviral RNA in stool specimens from poliomyelitis-selected cases S.C. Arya
97 107
121 135 145
155
165
171
177 187 193 197
205 217
223
231
233
237 239
Contents of Volume 25
363
Number 3—December 2002 Reviews Antiviral prophylaxis and treatment (excluding HIV therapy) S.M.L. Waugh, D. Pillay, D. Carrington, W.F. Carman Antiviral therapy for hepatitis B virus infections: new targets and technical challenges J. Feld, S. Locarnini Full Length Articles Detection of Australian bat lyssavirus using a fluorogenic probe I.L. Smith, J.A. Northill, B.J. Harrower, G.A. Smith Acute central nervous system complications in varicella zoster virus infections M. Koskiniemi, H. Piiparinen, T. Rantalaiho, P. Era¨ nko¨ , M. Fa¨ rkkila¨ , K. Ra¨ iha¨ , E.-M. Salonen, P. Ukkonen, A. Vaheri, The Study Group Confirmation of an outbreak of parvovirus B19 in a primary school using IgM ELISA and PCR on thumb prick blood samples C.J.P.A. Hoebe, E.C.J. Claas, J.E. Steenbergen, A.C.M. Kroes Apoptosis induction by the infection with Gilchrist strain of rubella virus L.D. Martinez, M.T. Zapata Initial therapy of HIV infection J.E. Gallant Clinical utility of nested multiplex RT-PCR for group F adenovirus, rotavirus and norwalk-like viruses in acute viral gastroenteritis in children and adults H.J. O ’Neill, C. McCaughey, P.V. Coyle, D.E. Wyatt, F. Mitchell Short Communications A rapid, single-step multiplex reverse transcription-PCR assay for the detection of human H1N1, H3N2, and B influenza viruses L.T. Daum, L.C. Canas, C.A. Schadler, V.A.H. Ujimori, W.B. Huff, W.J. Barnes, K.L. Lohman Investigation of a human case of rabies in the United Kingdom N. Johnson, D.W. Lipscomb, R. Stott, G. Gopal Rao, K. Mansfield, J. Smith, L. McElhinney, A.R. Fooks
241 267
285
293
303 309 317
335
345 351
Letter to the Editor Fourth generation human immunodeficiency virus (HIV) screening assays with an improved sensitivity for p24 antigen close the second diagnostic window in primary HIV infection B. Weber, T. Meier, G. Enders
357
Contents of volume Author index Subject index Application for membership to the European Society for Clinical Virology Application for membership to the Pan American Society for Chemical Virology
361 365 369 I II
Contents of Volume 25 Number 1 —July 2002 Editorial B. Carman, W.L. Drew
1
Review The role of the virology laboratory in the management of hepatitis C virus infection W.L. Irving
3
Full length articles Treat or test first? Decision analysis of empirical antiviral treatment of influenza virus infection versus treatment based on rapid test results V. Sintchenko, G.L. Gilbert, E. Coiera, D. Dwyer Prevalence of tick-borne-encephalitis virus antibodies in Lithuania A. Juceviciene, O. Vapalahti, A. Laiskonis, J. C& eplikiene; , P. Leinikki Detection of late pp67-mRNA by NASBA in peripheral blood for the diagnosis of human cytomegalovirus disease in AIDS patients B.S.N. Blank, P.L. Meenhorst, W. Pauw, J.W. Mulder, W.C. van Dijk, P.H.M. Smits, F. Roeles, J.M. Middeldorp, J.M.A. Lange Prevalence of mutations related to HIV-1 antiretroviral resistance in Brazilian patients failing HAART A. Tanuri, E. Caridea, M.C. Dantas, M.G. Morgado, D.L.C. Mello, S. Borges, M. Tavares, S.B. Ferreira, G. Santoro -Lopes, C.R.F. Martins, A.L.C. Esteves, R.S. Diaz, S.M.S. Andreo, L.A.P. Ferreira, R. Rodrigues, T. Reuter, A.M.S. Cavalcanti, S.M. de Oliveira, H.B. de Barbosa, P.R. Teixeira, P.N. Chequer Effect of perinatal short-course zidovudine on the clinical and virological manifestations of HIV-1 subtype E infection in infants R. Sutthent, K. Chokephaibulkit, D. Piyasujabul, N. Vanprapa, A. Roogpisuthipong, P. Chaisilwatana Performance of an in-house genotypic antiretroviral resistance assay in patients pretreated with multiple human immunodeficiency virus type 1 protease and reverse transcriptase inhibitors C. Peduzzi, P. Pierotti, G. Venturi, L. Romano, F. Mazzotta, M. Zazzi The dynamics of mutations in the YMDD motif of the hepatitis B virus polymerase gene during and after lamivudine treatment as determined by reverse hybridisation S.D. Pas, R.A. de Man, E. Fries, A.D.M.E. Osterhaus, H.G.M. Niesters Guidelines and Clinical Algorithms Guidelines for laboratory monitoring of treatment of persistent virus infections D. Pillay, V.C. Emery, D. Mutimer, M.M. Ogilvie, W. Carman, K. Mutton, T. Wreghitt, D. Westmoreland, J. Breuer, M. Zuckerman, on behalf of the Public Health Laboratory Service (PHLS ) Advisory Committee on Virology My Favourite Reagent Detection of HBV DNA using real time analysis S.D. Pas, H.G.M. Niesters A nested primer set targeting the cytomegalovirus glycoprotein B gene P.V. Coyle, D.E. Wyatt, G.M. Ong, A.P. Maxwell, C. McCaughey, H.J. O ’Neill
15 23
29
39
47
57
63
73
93 95
362
Contents of Volume 25
Number 2—August 2002 Reviews The virological and clinical significance of mutations in the overlapping envelope and polymerase genes of hepatitis B virus J. Torresi Paediatric HIV in 2002— a treatable and preventable infection E.G. Hermione Lyall Full length articles Methods in virus diagnosis: immunofluorescence revisited C.R. Madeley, J.S.M. Peiris Chronic human parvovirus B19 infection in rheumatic disease of childhood and adolescence H.W. Lehmann, L. Ku¨ hner, K. Beckenlehner, E. Mu¨ ller -Godeffroy, K.-G. Heide, R.-M. Ku¨ ster, S. Modrow A m-capture immunoassay for detection of human herpes virus-6 (HHV-6) IgM antibodies in human serum L. Nielsen, B.F. Vestergaard Rapid detection of enterovirus infection by automated RNA extraction and real-time fluorescence PCR H.F. Rabenau, A.M.K. Clarici, G. Mu¨ hlbauer, A. Berger, A. Vince, S. Muller, E. Daghofer, B.I. Santner, E. Marth, H.H. Kessler Novel mutations in the thymidine kinase and DNA polymerase genes of acyclovir and foscarnet resistant herpes simplex viruses infecting an immunocompromised patient D. Chibo, A. Mijch, R. Doherty, C. Birch The value of polymerase chain reaction for the diagnosis of viral respiratory tract infections in lung transplant recipients A. Weinberg, M.R. Zamora, S. Li, F. Torres, T.N. Hodges Human papillomavirus DNA testing by PCR-ELISA and hybrid capture II from a single cytological specimen: concordance and correlation with cytological results S. Venturoli, M. Cricca, F. Bonvicini, F. Giosa, F.R. Pulvirenti, C. Galli, M. Musiani, M. Zerbini Hepatitis G virus genotypes in a tertiary care centre in southern India P. Abraham, R. Hallett, S. Radhakrishnan, S. Raghuraman, G. Sridharan, C.G. Teo Encephalomyelitis due to human parechovirus type 1 V. Legay, J.J. Chomel, B. Lina, M. Aymard, S. Khalfan Identification of viral agents causing gastroenteritis among children in Buenos Aires, Argentina A. Bereciartu, K. Bok, J. Go´ mez Multicenter evaluation of the Bayer VERSANT™ HIV-1 RNA 3.0 assay: analytical and clinical performance C.A. Gleaves, J. Welle, M. Campbell, T. Elbeik, V. Ng, P.E. Taylor, K. Kuramoto, S. Aceituno, E. Lewalski, B. Joppa, L. Sawyer, C. Schaper, D. McNairn, T. Quinn Presence of parvovirus B19 DNA in chronic urticaric and healthy human skin T. Vuorinen, K. Lammintausta, P. Kotilainen, S. Nikkari Detection of human parvovirus B19 infection: a study of 212 suspected cases in the state of Rio de Janeiro, Brazil M.C.M.W. Wermelinger, W.M.R. Oelemann, M.C. Lima de Mendonc¸ a, F.G. Naveca, M.G. von Hubinger My Favourite Reagent Norwalk like virus by light cycler PCR I. Miller, R. Gunson, W.F. Carman Rational optimization of generic primers used for Norwalk-like virus detection by reverse transcriptase polymerase chain reaction H. Vennema, E. de Bruin, M. Koopmans Correspondence ‘An atypical pattern of HCV INNO-LiPA™ subtype’ G. Matera, G.S. Barreca, A.G. Lamberti, A. Quirino, D. Foca`, M.C. Liberto Re: RT-PCR based analysis of enteroviral RNA in stool specimens from poliomyelitis-selected cases S.C. Arya
97 107
121 135 145
155
165
171
177 187 193 197
205 217
223
231
233
237 239
Contents of Volume 25
363
Number 3—December 2002 Reviews Antiviral prophylaxis and treatment (excluding HIV therapy) S.M.L. Waugh, D. Pillay, D. Carrington, W.F. Carman Antiviral therapy for hepatitis B virus infections: new targets and technical challenges J. Feld, S. Locarnini Full Length Articles Detection of Australian bat lyssavirus using a fluorogenic probe I.L. Smith, J.A. Northill, B.J. Harrower, G.A. Smith Acute central nervous system complications in varicella zoster virus infections M. Koskiniemi, H. Piiparinen, T. Rantalaiho, P. Era¨ nko¨ , M. Fa¨ rkkila¨ , K. Ra¨ iha¨ , E.-M. Salonen, P. Ukkonen, A. Vaheri, The Study Group Confirmation of an outbreak of parvovirus B19 in a primary school using IgM ELISA and PCR on thumb prick blood samples C.J.P.A. Hoebe, E.C.J. Claas, J.E. Steenbergen, A.C.M. Kroes Apoptosis induction by the infection with Gilchrist strain of rubella virus L.D. Martinez, M.T. Zapata Initial therapy of HIV infection J.E. Gallant Clinical utility of nested multiplex RT-PCR for group F adenovirus, rotavirus and norwalk-like viruses in acute viral gastroenteritis in children and adults H.J. O ’Neill, C. McCaughey, P.V. Coyle, D.E. Wyatt, F. Mitchell Short Communications A rapid, single-step multiplex reverse transcription-PCR assay for the detection of human H1N1, H3N2, and B influenza viruses L.T. Daum, L.C. Canas, C.A. Schadler, V.A.H. Ujimori, W.B. Huff, W.J. Barnes, K.L. Lohman Investigation of a human case of rabies in the United Kingdom N. Johnson, D.W. Lipscomb, R. Stott, G. Gopal Rao, K. Mansfield, J. Smith, L. McElhinney, A.R. Fooks
241 267
285
293
303 309 317
335
345 351
Letter to the Editor Fourth generation human immunodeficiency virus (HIV) screening assays with an improved sensitivity for p24 antigen close the second diagnostic window in primary HIV infection B. Weber, T. Meier, G. Enders
357
Contents of volume Author index Subject index Application for membership to the European Society for Clinical Virology Application for membership to the Pan American Society for Chemical Virology
361 365 369 I II