Journal of
MOLECULAR STRUCTURE ELSEVIER
Journal of Molecular Structure 326 (1994) 109-122
Polarised FT-IR and Raman spectra of P-D-fructopyranose single crystals J. Barana, H. Ratajczaka, E.T.G. Lutzb3*, N. Verhaeghb, H.J. Luingeb, J.N. van der Maasb aInstitute of Low Temperature and Structure Research. Polish Academy of Sciences, Okolna 2,50-950 Wroclaw, Poland bDepartment of Analytical Molecular Spectrometry, Faculty ojchemistry. Utrecht University, P.O. Box 80083, 3.508 TB Utrecht, Netherlands
Received 1I April 1994
Abstract Polarised FT-IR and Raman spectra have been recorded for P-n-fructopyranose single-crystal samples at room temperature. The assignment of absorption bands to the stretching (Lou) and out-of-plane bending (70~) vibrations of the hydrogen-bonded OH groups is proposed on the basis of the ‘oriented gas’ model approximation. For the very weak H-bond the transition dipole moment is located in the direction of the O-H bond whereas it lies in the 0. . .O direction for the stronger H-bond, 0(2)-H. . . O(1). Different couplings between the vOHvibrations are discussed and proposed based on polarised spectra. Assignment is made of the stretching vibrations of the CHz and CH groups. Other vibrations appear to be mixed and very complex. Only a tentative assignment for the C-O stretching vibrations is proposed.
1. Introduction D-Fructose is a well-known member of the ketose family. It is present in nature and known to be the sweetest of the naturally occurring sugars. Shallenberger and Acree’s hypothesis [l] of sweetness suggests that it is induced by the existence of a suitable AH-B system, where A and B are each electronegative atoms in a particular geometric position and H is an acidic proton. According to this model, a molecule exhibits sweet taste by hydrogen bonding with the complementary AI-I-B system on the receptor site. Thus, it has been suggested [2] that the unit giving rise to sweetness is the anomeric hydroxyl group (the AH moiety) and the atom 0( 1) * Corresponding author.
(the B moiety). This proposal is supported by the lower degree of sweetness of ,8-D-arabinopyranose and 2,6-anhydro-D-mannitol; two structural analogues of /3-n-fructopyranose, which lack the hydroxymethyl and 2-hydroxyl group, respectively. So far P-n-fiuctopyranose is the only isomer of n-fructose isolated in crystalline form. Information about the hydrogen bonds can be obtained from vibrational spectroscopy. Raman spectra of aqueous solutions of n-fructose have been already reported [3-51. The relationship between the frequencies of the stretching modes of hydrogen-bonded OH groups and the O-H ... 0 distances has been studied previously for the title compound by Szarek et al. ]6]. Lutz et al. [7] performed variable low-temperature measurements of the powder FT-IR spectra for samples with
~22-2860/94/~07.~ @ 1994 Elsevier Science B.V. All rights reserved SSDZ 0022-2860(94)08346-J
110
J. Baran et al/J. Mol. Struct. 326 (1994) 109-122
different concentrations of deuterium. These experiments prove the presence of vibrational coupling between neighbouring hydroxyl groups with similar vibrational frequencies. In order to verify the presence of vibrational coupling we decided to measure and analyse polarised vibrational spectra of /3-o-fructopyranose single crystals. This paper reports polarised FT-IR and Raman spectra of the title compound measured at room temperature. We tried to find a correlation between the crystal structure determined by neutron [8] and X-ray [9] diffraction methods and the polarised IR and Raman spectra. The properties of the bands in the polarised spectra are important features, which allow us to verify previous assignments.
Single crystals of /3-o-fiuctopyranose were grown from a solution of water and ethanol. The crystals were oriented under a visible light polarising microscope using the X-ray technique. The lattice constants were matched with literature values [9]. Two plates were cut for IR measurement, one parallel to the ab (AT) plane and one parallel to the bc (YZ) plane. The samples were stuck onto KBr windows with paraffin wax and then polished (using ethanol and water) until IR transmission measurements were possible. FT-IR spectra were measured on a Bruker IFS-88 spectrometer equipped with an AgBr wire-grid polariser and DTGS detector. Scanning parameters were: resolution, 2 cm-‘; number of scans, 32; apodization, weak. Accuracy for the peak positions is 1 cm-’ for sharp peaks and 2 cm-’ for broad bands. Raman spectra were measured with a JobinYvon Ramanor UlOOO spectrometer, with 90” geometry, equipped with a photomultiplier on a cubic shaped sample with edges parallel to the orthorhombic axes. The exciting light was the 514.532nm line of a Spectra-Physics Ar+ laser (Model 2016-5) with a power of approximately 1 W.
(Fig. 1) has been determined by X-ray [9] and neutron diffraction [8] techniques. Different notations for the orthorombic axis are used by the authors of these studies. For uniformity we will use those of Takagi and Jeffrey [8] (a = 9.191(2), b = 10.046(2) and c = 8.095(2)). The crystal belongs to the P2i2i2i space group. The primitive unit cell contains four molecules, Formal analysis of the fundamental modes (k = 0) is given in Table 1. P-DFructopyranose molecules occupy sites with Ci symmetry in the crystal. Therefore, all external and internal modes (66) are allowed in IR and Raman. As follows from the correlation diagram (Table l), each vibration should be split into four components (A + B1 + B2 + Bs) due to the correlation field (Davydov) effect. All are allowed in Raman whereas only the B modes are IR-active. In view of the weak correlation field effect, the frequencies of the bands arising from the same internal vibration but observed at different polarisation directions may be similar. The ratio of their intensities (dichroic ratio) could be determined on the basis of the ‘oriented gas’ model approximation [14]. In this approach the ratio of intensities of the bands in the polarised IR spectra are determined by the square of the directional cosines of the transition dipole moment (TDM) of the vibration of interest. Although the intensity of you bands in Raman spectroscopy is commonly very weak, owing to the polarisability, for crystalline sugars, it can be very informative [15]. From theory it is known that there is a slightly more complex relation between the intensities of the bands in polarised Raman spectra. They are also determined by the directional cosines, albeit in higher power. Since the molecules occupy Ci positions, group theory cannot be used to determine the TDM (axes of the Raman polarisability tensor) orientation of the internal vibrations of the molecule. However, for the well localised (pure) vibrations one may assume a certain direction for the TDM. This will be discussed in the following sections of this paper.
3. Crystal structure and selection rules
4. Results and discussion
2. Experimental
The structure of crystalline /3-n-fructopyranose
FT-IR spectra are shown in Figs. 2 and 3 in the
J. Baran et al.lJ. Mol. Struct. 326 (1994) 109-122
111
(a)
W
structure of orthorombic P-D-fntctopyranoside crystals (P212121)
Fig. 1. Molecular structure of D-fructopyranose (a); crystal structure of ,L-D-fructopyranose (b); hydrogen-bonded chain in the crystal
Bl (c). regions 3700-2000 cm-l and 2000-400 cn--’ respectively. The positions of the band maxima are listed in Table 2. Polarised Raman spectra are shown in Figs. 4 and 5 for the regions 3700-2OOOcrC and
2000-lOcm-’ respectively. The positions of the Raman bands are listed in Table 3. An exploded view of the Ok-stretc~ng region is presented in Figs. 6 (IR) and 7 (Raman). Fig. 8
112
J. Baran et al./J. Mol. Strut.
Table 1 Correlation diagram and classification of the fundamental (k = 0) modes for a ~-o-fru~topyranose crystal (space group P2,2,2, = 0;; z = 4) Site group
Factor group
Cl
4
Modes8
326 (1994) 109-122
\ POWdH deutemted ~-D-fr~clapyranase
Selection rules
T,
T
R Ni IR
3
3
66
2
3
66
B2
0 1 1
B3
1
2 3
3 3
66 Y(= b) 66 X(= a)
Raman Powder
A
A Rt
Z(= c)
XX,YY,ZZ xy
xz yz
a Acoustic, T,; translational, T, librational, R, and internal, Ni. Single crystal sample XY
E II Y
deuterated p-D-fructopyranose
wavenumbers
icrn-l]
Fig. 3. Complementary IR spectra in the region 2000-4#cm-’ of the compounds listed in Fig. 2.
Single crystal sample
XY
shows the IR spectra of the powder sample measured in the region 900-550cm-’ at 300 and 110 K. The intensities of the OH bands in Fig. 7 are scaled, taking into account the laser power. 4.1. Stretching vibrations of the OH groups
Single crystal sample
3oGo wavenumbers
2600
YZ
2200
[cm-‘1
Fig. 2. IR spectra in the region 4000-2000cm-’ of crystalline fi-D-fructopyranose measured as a powder (deuterated and nondeuterated) and single crystals XY and YZ measured at different polarisation directions.
As follows from the diffraction data [8], all OH groups of ~-D-f~ctopyrano~ are involved in hydrogen bonding (see Fig. 1 and Tables 4 and 5 where the structural parameters are listed}. Each of the hydroxyl groups forms an intermolecular hydrogen bond. Except for 04-H, all hydroxyl groups are linked into an infinite chain and appear to be both proton donor and proton acceptor. Some protons, H(1) and H(3), are involved in a bifurcated hydrogen bond. In order to find some correlation between the polarised IR and/or Raman spectra and the crystal structure, we
J. Baran et al.lJ. Mol. Struct. 326 (1994) 109-122 Table 2 Wavenumbers (cm-‘) of the bands in the spectra of powder and single-crystal samples of fl-o-fructopyranose
Tabie 2 (~ntinued)
Powder
Normal
Normal
3524
Crystal Partly de&d.
EllX B3
EIIY B2
EIIY
EIIZ
B2
%
3520
3521
3524
3524
3521 3465
3420
3420
3420
3420
Powder
875 865
3210
3360 3273 3204
3397 3356 3273 3204
3013
3013
3014
3358
3360
3200 3014 2605 2523 2496 2394
1430 1398
1394 1355 1350 1340
1335 1297 1275 1265 1251 1232
1312 1297 1286 1271 1265 1249
1427
1428
1429
1399
1398
1398
1431 1411 1398
1337
1335
1344 1335
1344 1339
1296
1296
1300
1265 1250 1232
1264 1251 1233
1264 1252
1176
1175
1175
1176
1151
1150
1149
1149
1134 1093
1135 1094
1077
1079
1135 1094 1085 1081
1056 1030
1054 1032
1050 1031
978
978
979
981
925
925
926
923
1275 1266
1207 1188 1176 1168 1149 1141 1135 1094 1080 1043 1052 1032 979 960 924
1101 1076 1060 1047 992 979 960 940 927 904
1080 1060
Crystal Partly deutd. 875
EM’ B,
EIIY
EllY
EIIZ
B2
B2
Bl
875 867
875 867
875 867
824
827
875
855 826 819
3411 3403 3360 3270 3230 3195 3013 2990
113
784 687 628 599 574 544 526 469 444 425 408 387 324 311 303 290 280 267 244 235
821 816 804 771 625 585
786
784 682 628 600 580
783 685 629 600
521
540 520
784 691 628 595 570 540 525
469
465
464
469
425 404
425 408
426 411
426 406
628 598 572 540
526 492
428 404 390 321 307
818
293 258 252 239
assume that the stretching vibration of each OH group is independent of those of the remaining OH groups of the same fructopyranose molecule. This seems to be logical since each OH group participates in a hydrogen bond of different strength. Keeping this in mind, we assume that the TDM of vOH is determined by either the O-H, H +- .O or the 0. * 10 direction (see Tables 4 and 5) and that in those directions the largest component of the Raman pola~sibility tensor appears. Except for the sharp band at about 352Ocn-‘, previously assigned to the stretching vibration of the weakest hydrogen bond O(4)H - - . O(2’) f6,7], the observed bands are broad both in XR (Fig. 2, see also Fig. 6) and in Raman spectra (Fig. 4, see also Fig. 7). The intensities of the bands at about 352Ocm-’ are similar in the IR spectra polarised parallel to the
114
J. Baran et al.lJ. Mol. Strut. 326 (1994) 109-122
81
z (X2) Y
52
z (YZ) x
-_:I s_k _i--
A
xwz
A
Z(WY
A
lfi 3em
1
-’
3200
zeoo
2400
2
wa~enumber~ [cm-‘]
d 2wo
1600
1200 wavenumbers
Fig. 4. Raman spectra of single-crystal samples in the region 4000-2OOOcn-’ measured at different polarisation directions. X, Y and 2 axes. This seems to be in accordance with the assumption that a TDM of the Vou vibration of this hydrogen bond is predominantly oriented along the 0(4)-H bond (Table 4). In the Raman spectra the strongest A-type band appears at the (XX)geometry; compared to the by) and (zz) spectra it is at least eight and nine times stronger (scaling remark!), Note that the position of the IR band polarised along the Y axis (3524cm-i, B2) is at a slightly higher frequency than those in the spectra polarised along the X (Bs) and Z (Bi) axis (3521 cm-i). A similar frequency shift is observed in the Raman spectra, where the band (3526cm-i) in the xz spectrum (B2) appears at higher frequency than those (3521 cm-‘) in the A ((XX), (JJ~)and (zz)) and Bi CJCC) spectra. The band at about 352Ocn-’ is very weak in the Bsbz) spectrum. The observed frequency difference is due to a Davydov type interaction between the
800
400
0
[cm-‘]
Fig. 5. Complementary Raman spectra in the region 2000400 cm-’ of the compounds listed in Fig. 4.
stretching vibrations of the symmetry-equivalent 0(4)-H . . .0(2’) bonds. This interaction is strongest for the O-H groups related by the two-fold screw axis parallel to Y(b). Assuming that for stronger H-bonds the TDM is oriented along the O... 0 rather than along the O-H axis (see Table 4) the stretching vibration of the strongest hydrogen bond at 3204cm-’ in the IR spectra, polarised along the Z and Y axes, should be assigned to the 0(2)-H .. .O( 1’) bond. In the Raman spectra, this band is weak (M 3200 cm-‘). According to the directional cosine values this vibration should not be observed in the (XX)Raman spectrum whereas it should be present in the cvu>and (zz). As it happens it is barely present in the (zz) spectrum, the major contribution being in the by) spectrum. This assignment corresponds with previous literature proposals [6, 71.
115
J. Baran et al./J. Mol. Struct. 326 (1994) 109-122 Table 3 Wavenumbers (cm-‘) of the Raman bands of a fl-n-fructopyranose single crystal Z(xx)Y A
X(z) Y Zcvy)X Z(xz) Y A A R2
3521
3521
3521
z(,Vz)xY(Jx)z
X(yy)Z
B3
BI
A
3521 3514 3425
3521
3526 3425 3407
3400 3394 3350 3015 2992 2962
3400
3397
3193 3015 2990 2960
3190 3015 2991 2962
3016 2991
3402 3397
3350 3190 3015 2991 2962
3360 3016 2992 2962
3190 3016 2991 2962
2940 2934 2925 2902
2941
2941
2925 2902 2892
2925 2904
Table 3 tcontinu~)
Z(xx)Y X(zz)Y Z(yy)X
Z(xz)Y
Z~z)XYdyx)Z X(yy)Z
A
A
A
B2
B3
BI
A
1081 1066
1080
1081 1065 1048
1081 1063
1081 1061
1082 1062 1049
1081 1064 1049
1030 981 927 876 867 826 783
1036 979 926 874 868 820 793
982 926 873 870 820 785
978 927 874
677
699
628
628
630
630
595
594 575
601
595
526 466
526 471
527 471 463 432
527
977 927 874
1048 1035 978 924 874
819
819
819
778
778
779
2924 2903 2890 2196 2731 2690 2609
2390 2150 1960 1470 1453 1435 1413
2940 2934 2924 2902
2780 2670 2593 2508
2941 2924 2903 2898 2856 2780 2733 2660 2604 2520 2484 2390
2933 2922 2902
2512
2782 2727 2650
2734
625 594
521
526
462
462
462
427
427
420
421
530
2732 2660 2526
2523
779
423 420
429
401
1470 1458 1435
1425 1413
1412
1413 1399
1371
1386 1372
1472 1455 143.5
1473 1433
1473 1457 1436
322 297
419
420 394
1370 1346
1403
1399
1371
188 1373
1343
153 138
1334
1333 1324
1220 1177
1243 1221 1178
1145
1145
1145
249 181 152 133 117 108
1325 89
1261 1252 1242 1222 1176
324
1417
1340
1303 1278 1260
428
401
279 249
1349
1324
427
345 1470 1455 143s
1470 1456
463
416
2160
1389
1276 1261 1253
630 625 59s
626 594
2856 2730
819
658
2957 2941
978 926 874
1278 1263
1176 1153 1139 1088
1267 1252 1219 1176
1136 1088
1276 1270 1251 1240 1226 1178
1252 1245 1221 1178
1144
1145
f090
1088
71 58 48
91 78 71 48
272 249 236 183 161
289 272 258 234
287
292 279 254
249 236
249 176
179 160
156 133
131
131
109 93 83
109
103
110
73 58 45 39
73
133
166 138
85
85
59
74 59
44
For the assignment of the three remaining hydrogen bonds, 0(1)-H.V.0(3’)-H.~~0(5’)H. * - 0(2’) (see Fig. 1, Table S), to the appropriate stretching vibrations three band maxima remain
J. Baran ef al.lJ. Mol. Struct. 326 (1994) 109-122
116
A
3500 wavenumbers
1
I
3300
3100
[cm-l]
3 3600
3480
3360
wavenumbers
Fig. 6. Expanded OH-stretching region of the IR spectra (see Fig. 2).
namely 3420, 3397 and 3360 cm-‘. The IR spectral data in the region 3425-3250 cm-’ are obscured by the presence of a very broad low-intensity absorption at 3273 cm-’ . This band appears to be polarised along the Z and Y axis but is absent in the Raman spectra. With reference to previous low-temperature and deuteration experiments [7] and the absence of this band in the OD spectral region, no logical assignment can be presented for this band. It might originate from some local inclusion of ethanol/water impurities in the crystal. Lutz et al. [7] suggested vibrational coupling between the stretching vibrations of 0(3)-H and 0(5)-H on the basis of isotopic (deuteration) changes but they do not exclude coupling between 0(1)-H and 0(3’)-H. In fact the O-H bond lengths for 0(3)-H and 0(5)-H are virtually identical, (0.964(3) and 0.963(3) A respectively). However, the corresponding 0 . . .O distances,
3240
3120
[cm-‘]
Fig. 7. Expanded OH-stretching region of the Raman spectra (see Fig. 4).
2.930(2) and 2.805(2) A, differ considerably. The 0.. .O distances for the hydrogen-bond pairs 0(1)-H and 0(3/)-H are less different (2.930(2) and 2.858(2) A, respectively), whereas the correspondingO O-H bond lengths (0.964(3) and 0.972(3) A, respectively), differ only slightly. Without invoking any inter-hydrogen bond coupling and the orientation of the TDM along the O-H, H+..O or 0.. .O axis, there is no agreement between the polarised spectra and the crystal structure as shown in Table 5. Assuming the orientation of the TDM along the 0 . . .O direction again no agreement is found with the polarised spectral observations (Table 5). In order to explain this discrepancy, one may consider coupling between vibrations of adjacent hydrogen bonds (OH groups) in the chain. The simplest approach considers in-phase (v,) and
J. Baran et al./J. Mol. Struct. 326 (1994) 109-122
-
T=llOK
.---
T=fJOOK
117
3 s 8 f
s
I
I
!
I
I
1
I
700
800
1
wavenumbers
600
5
[cm-l 1.
Fig. 8. IR powder spectra in the region 900-550cm-’
out-of-phase (vaS) coupling between the vibrations of the neighbouring OH groups, 0(3)-H and 0(5)-H, as proposed by Lutz et al. [7] (Model I) and coupling between 0(1)-H and 0(3)-H (Model II). The directional cosines of the TDM for these vibrations and proposed assignments are
measured at 300 and 110 K.
listed in Table 6. It appears that neither Model I nor Model II corresponds fully with the observed polarised spectral intensities. A tentative assignment including disagreements is presented in Table 6. It is difficult (or impossible), however, to find definitive proof that this ‘local’ type of vibrational
Table 4 The square of the directional cosines for the transition dipole moments (TDM) of the vOH stretching vibration of the strongest (0(2)-H. 0( 1’)) and weakest (0(4)-H.. O(2’)) hydrogen bond assuming that the TDM is determined by one of the following directions: O-H, H ‘0 or 0.. ‘0 H-Bond
Bond
Distance (A)
co? (TDM)
Assignment of frequency (cm-‘)
a(x)
b(Y)
c(Z)
IR
Raman
0(2)-H. 0( 1’) Angle 154.6”
O-H H...O o...o
0.979 1.750 2.668
0.222 0.003 0.043
0.322 0.493 0.446
0.456 0.505 0.510
3204 (Y, Z)
3 190 (YJJ,zz, YZ)
0(4)-H. . . O(2’) Angle 159.8”
O-H
0.948
0.503
0.292
0.205
3521 (X,Z) 3524 (Y)
3521 (xx,yy,zz) 3526 (xz) 3514 (Jz)
H...O o...o
2.065 2.972
0.805 0.722
0.158 0.200
0.037 0.078
118
J. Baran et al./J. Mol. Struct. 326 (1994) 109-122
Table 5 The square of the directional cosines for the vOHstretching vibration of three hydrogen bonds for which coupling is possible H-Bond
Bond
Distance (A)
cos2 (TDM)
Assignment of frequency (cn-‘)
a(x)
b(Y)
c(Z)
IRa
Raman
O(l)-H...0(3’) Angle 152”
O-H H...O o...o H...06,
0.972 1.695 2.859
0.791 0.399 0.542 0.014
0.024 0.300 0.184 0.628
0.185 0.301 0.273 0.359
3420 ( Y, A’*)?
3425 (xz, zy)?
0(3)-H.. .0(5’) Angle 169.3”
O-H
0.964
0.091
0.241
0.668
3397 (Z)
3400 (zz, xx, yx) 3397 CVY)
H...O o...o H...06,
1.977 2.930
0.139 0.123 0.067
0.106 0.145 0.902
0.755 0.732 0.031
O-H H...O o...o
0.963 1.869 2.805
0.137
0.290 0.382 0.357
0.573 0.611 0.609
3360 (X, Y*, Z)
3360 (xx, xy, yz)
0(5)-H.. .0(2’) Angle 163.2”
a An asterisk denotes disagreement with prediction.
coupling really occurs. The effect of Davydov (crystal) coupling on peak positions in the polarised IR and Raman spectra can be (easily) recognised when comparing band maxima in different polarisation . .0(2’) with its peak posidirections, viz. 0(4)-H. tion at 3524-3520cm-‘. 4.2. Bending vibrations of the hydroxyl groups The in-plane bending vibrations of the OH groups, bon, are strongly mixed with other internal vibrations of ,0-n-fructopyranose [lo] and most
of the bands in the region 1500-800 cm-’ are sensitive to deuteration (see Fig. 3). Therefore, it is difficult to give a correct assignment of these bands to the appropriate So, modes. The out-of-plane bending vibrations, Ton, can be easily recognised because of their larger bandwidth. The 7or.r bands appear to be more pure which follows from the observed isotopic shift ratio (1.34-l .40). Similar bands have been observed in the spectra of reference compounds like adamantanol-1 (722 and 655cm-t) [ll], 2-phenyladamantanol-2 (600 cm-‘) [ 121 and 2-
Table 6 The square of the directional cosines of the TDM of the vibrations obtained from in-phase (v,) and out-of-phase (v,) coupling between the stretching of 0(3)-H with 0(5)-H (Model I) and 0(3)-H with 0(1)-H (Model II), respectively Assignment of frequency (cm-‘)
cos2 (TDM) 4x) Model I
0(3)-H
va
0.002
Z(l)-H
0.791 0.298
Raman
0.997 0.002 0.185
3397 (Z) 3360 (X, 3420 (X, Y) T*,Z)
= 3400 (zz, yy, xx) 3360 (xz, 3425 (xx) zy)
3420 (A’, rC) 3397 (Z) ?? 3360 (X, Y,Z)
3425 (xz, zy) = 3400 (zz, yy, xx) 3350 (xx)
+ ~2 and Y)
0.001 0700 0.024 and 0(1)-H
IR”
c(Z)
b(Y) and 0(5)-H
Model II
0(3)-H
va
0.459
0.037
+ v2 and v, 0.504
&-H
0.137 0.379
0.290 0.457
0.573 0.164
’ An asterisk denotes disagreement with prediction.
J. Baran et al.lJ. Mol. Strut. 326 (1994) 109-122
119
Table 7 The square of the directional cosines for the bending vibrations of the hydrogen bonds co? (TDM)
Bonds and vibrations
0(1)-H. .0(3’) Out-of-plane In-plane O(2)-H...O(l’) Out-of-plane In-plane 0(3)-H.. O(5’) Out-of-plane In-plane 0(4)-H.. .0(2’) Out-of-plane In-plane 0(5)-H.. .0(2’) Out-of-plane In-plane
Assignment of frequency (cm’)
x(a)
y(b)
Z(c)
IR
Raman
Aa Bb A B
0.205 0.103 0.004 0.106
0.026 0.211 0.950 0.765
0.769 0.687 0.046 0.128
540 (Z)
530 cvr)
A B A B
0.547 0.027 0.231 0.751
0.026 0.484 0.652 0.194
0.426 0.489 0.118 0.055
680 (Z, y)
677 (xz)
A B A B
0.067 0.746 0.841 0.162
0.612 0.049 0.147 0.710
0.321 0.205 0.012 0.127
A B A B
0.409 0.047 0.087 0.449
0.051 0.606 0.658 0.102
0.540 0.347 0.255 0.449
A B A B
0.322 0.496 0.175 0.001
0.003 0.266 0.705 0.442
0.675 0.238 0.121 0.557
<400
< 400
572 (X y,z)
575 fjJz)
a The TDM of the out-of-plane mode is perpendicular to the plane defined by the C-O-H atoms; the TDM of the in-plane bending mode lies in that plane and is perpendicular to the O-H bond. b The TDM of the out-of-plane mode is perpendicular to the plane defined by the O-H ‘0 atoms; the TDM of the in-plane mode lies in that plane and is perpendicular to the O-H bond.
ethynyladamantanol-2 (655 cm-‘) [ 131,with similar hydrogen bonds to the title compound, and 0. . .O distances of 2.749,2.813 and 2.839 A, respectively. The approximate orientation of the TDM for the You modes has been predicted on the basis of two different models: model A with the TDM of the out-of-plane mode perpendicular to the plane defined by the C-O-H atoms and model B with the TDM of the out-of-plane mode perpendicular to the plane defined by the 0-H. . .O atoms (see Table 7). Predictions from model B seem to fit better than those based on model A. However it is recognised that, in agreement with the stretching vibrations, the TDM is dependent on the strength of the hydrogen bond. The bands at about 690 (l/Z) and 685 cm-’ (I/Y) are assigned to You of the shortest (strongest) 0(2)-H.. . O(1) hydrogen bond. Upon cooling to 110 K in the powder spectrum this peak shows
a blue shift to about 710cm-’ and as expected it also becomes sharper (Fig. 8). In the region between 600-500cm-’ a complex broad band is observed with at least two maxima at 571 and 53Ocm-‘. These bands are polarised parallel to X (571 cm-‘) and Z (53Ocm’) and not to Y. For the thicker XY sample, only the lowfrequency band is barely present. Assignment of one of these bands to You of 0(3)-H. . .0(5’) is obvious but the involvement of 0(1)-H . . . 0( 3’) and/or 0(5)-H. . .0(2’) is questionable. Upon cooling, these bands shift to approximately 588 and 566cm-’ (110K) in the powder spectrum (Fig. 8). The You band of the ‘weak’ 0(4)-H.. .0(2’) hydrogen bond is expected at the lowest frequency, beyond the spectral region studied (< 400 cm-‘). An interesting phenomenon can be noticed in the
120
J. Baran et al/J. Mol. Strut. 326 (1994) 109-122
Table 8 The square of the directional cosines of the TDM for the C-H vibrations Bondsa
Vibrations
cos’ (TDM)
Assignment of frequency (cm-‘)
x(a)
Y(b)
Z(c)
IR
Raman
C(l)-Hz 1.092(3) 1.092(3)
“a “S w
0.890 0.090 0.020
0.085 0.303 0.612
0.026 0.607 0.348
2990 (_I’,Y) 2932 p
2992 (xx) 2991 (JY, zz, xz, yz) 2934 (zz)
C(6)-Hz 1.095(3) 1.093(3)
vu “9 w
0.445 0.549 0.005
0.550 0.438 0.013
0.005 0.013 0.982
3013 (X,Y,z) 2920 p
3015 (xx,xz,yy,zz,yz) 2924 (xx, YY,xz, YZ)
C(3)-H 1.097(2)
VCH
0.033
0.947
0.020
2939 p
2941 (yy, xx, zz, yx)
C(4)-H 1.097(2)
“CH
0.055
0.913
0.032
2960 p
2962 (JJ~,xx, zz, yz)
C(5)-H 1.101(3)
“CH
0.050
0.095
0.855
2901 p
2902 (zz, xx, yy, xz, yz)
a Lengths in angstroms.
region 780-850cm-’ of the powder IR spectrum (Fig. 8). Two bands at 784 and 819cm-’ (with a shoulder at approximately 826cm-i) appear at room temperature. Upon cooling to 110K new bands at about 805, 798 and 826cm-’ (shoulder) appear. In view of their (relatively) high frequency these bands cannot be assigned to You vibrations but the temperature sensitivity shows that somehow they must be related to a vibration sensitive to (intermolecular) interaction. 4.3. Stretching vibrations of the CH2 and CHgroups The /3-D-fructopyranose molecule contains two CH2 and three CH units. The corresponding stretching vibrations are supposed to be pure and easy to assign. Szarek et al. [6] proposed an assignment inconsistent with the one based on polarisation measurements and presented in Table 8. Taking into account polarisations of IR and Raman bands one has to assign the band at about 3014cm-i to the asymmetric stretching vibration (Vc&) of the C(6)H2 group and that at 2990cm-’ to the same vibration of the C(1)H2 group, consistent with conclusions drawn from the spectra of P-Dfructopyranose and L-sorbose published by Szarek et al. [6]. In these two molecules the only structural difference is the substitution of the OH group at
the C(5) atom, equatorial and axial. Compared with the hydroxymethyl C(1)H2-OH group, a somewhat larger steric influence of this OH group on the adjacent C(6)H2 group is to be expected. This explains the difference in the band maxima of the r+H vibrations of the C(6)H group (3014 and 3006cm-i for fructose and sorbose, respectively) and the similarity between the VoH vibrations of the hydroxymethyl groups (2990 and 2988 cm-‘). In the polarised IR spectra information about absorptions from the stretching vibrations of the CH groups is blocked by the paraffin (Nujol) bands. The Raman spectra are well polarised in this region. The very strong bands at 2962, 2941 and 2902 cm-’ can be assigned to the stretching vibrations of C(4)-H and/or C(3)-H and C(5)-H, respectively. Notice that it is impossible to discriminate between C(4)H and C(3)H as their polarisation properties are almost identical (see Table 8). The bands at 2934 and 2924 cm-’ are assigned to the symmetric stretching vibration of the C(1)H2 and C(6)H2 groups, respectively. 4.4. The C-O stretching vibrations According
to
Wells and
Atalla
[lo]
these
J. Baran et al/J.
121
Mol. Struct. 326 (1994) 109-122
Table 9 The square of the directional cosines of the TDM for the C-O vibrations Bond
w)-w) C(2)-O(2) C(3)-O(3) C(4)-O(4) C(5)-O(5) C(2)-O(6) C(6)-O(6)
Bond length (A)
1.414 1.407 1.420 1.418 1.426 1.413 1.430
Assignment of frequency (cm-‘)
co? (TDM) Y(a)
Y(b)
Z(c)
IR
Raman
0.059 0.070 0.932 0.258 0.069 0.933 0.060
0.938 0.927 0.038 0.354 0.918 0.015 0.063
0.003 0.004 0.029 0.389 0.013 0.052 0.877
1135 (Y,x) 1149 (Y,X,z) 1094 (X, Y) 1080 (X, Y,Z) 1050 (X,Y) ? ?
1139 (xz,yz) 1145 cvy, zz, xx) 1087 (_w,xwz) 1081 tjy,xx, zz,xz,yz) 1048 tj~y,zz) ? ?
vibrations are expected in the region 1200900 cm-’ and can be strongly mixed with other vibrations. Szarek et al. [6] assigned only the band at 1175crY’ to the C-O stretching and bending modes of the hydroxymethyl. As follows from our data this band is sensitive to deuteration and probably arises from in-plane bending vibrations of the hydrogen bonds. Three strong bands at 1101, 1076 and 1047cn-’ are present in the IR spectrum of deuterated /3-o-fructopyranose. Their counterparts are found at about 1094, 1080 and 1052 cm-’ in the spectra of the non-deuterated compound. According to the polarisation properties of these bands, listed in Table 9, an assignment to the C-O stretching vibrations of the C(3)0, C(4)O and C(5)O groups, respectively, is most likely. The bands at 1149 and 1135cm-’ might be assigned to the C-O stretching vibrations of the C(l)0 and C(2)O groups; however, this seems to be in conflict with earlier conclusions based on primary and secondary aliphatic alcohols [16]. The C-O stretching vibration of primary alcohols has been assigned to absorptions at lower wavenumber than for secondary alcohols, 1080-lOlOcm-’ and 1120- 1090 cm-’ respectively. It is difficult to propose a reliable assignment for the vibrations of the C-O-C vibrations as they are strongly mixed with the C-C stretching vibrations.
isation directions, based on calculations on the ‘oriented gas’ model, is established for the orientation of the TDM of the weakest proton donor O(4)H. . *O(2) (3520 cm-‘) along the O-H bond and of the TDM of the strongest H-bond 0(2)H...O(l) (3204cm-‘) in the direction of the 0 . . .O axis. However, as all vibrations of the OH groups are not pure, the transition dipole moment of the particular stretching vibrations will not be oriented exactly along the O-H or 0 .. - 0 directions of the hydrogen bonds to which the band is formally assigned. No foolproof assignment could be made for 0(1)-H, 0(3)-H and 0(5)-H. In addition to vibrational coupling Davydov splitting is recognised, e.g. a minor shift of peak positions at different polarisation directions. The bandwidth of the OH-stretching vibrations is strongly dependent on the strength of the H-bond, stronger H-bonds show broader bands. The out-of-plane Ton bending modes of the strongest hydrogen bonds are assigned taking into account the relation with the OH-stretching region, e.g. the strongest H-bond gives rise to the highest Ton frequency [13]. The stretching vibrations of the CH;! and CH groups appear to be ‘pure’. Their polarisation properties in Raman spectra (and for a limited region of the IR spectra) correspond very well with prediction based on the assumed ‘oriented gas’ model.
5. Conclusions
References
The best agreement between experimentally observed band intensities and predicted polar-
[l] R.S. Shallenberger 480.
and T.E. Acree, Nature, 216 (1967)
122
J. Baran et al./J. Mol. Struct. 326 (1994) 109-122
[2] R.S. Shallenberger, Pure Appi. Chem., 50 (1978) 1409. [3] M. Mathlouthi and D.V. Luu, Carbohydr. Res., 78 (1980) 225. [4] M. Mathlouthi, C. Luu, A.-M. Meffroy-Biget and D.V. Luu, Carbohydr. Res., 81 (1980) 213. [5] T.W. Barrett, Spectrochim. Acta, Part A, 37 (1981) 233. [6] W.A. Szarek, S.-L. Korppi-Tommola, H.F. Shurvell, V.H. Smith, Jr. and O.R. Martin, Can. J. Chem., 62 (1984) 1512. [7] E.T.G. Lutz, Y.S.J. Veldhuizen, J.A. Kanters, J.H. van der Maas, J. Baran and H. Ratajczak, J. Mol. Struct., 270 (1992) 381. [S] S. Takagi and G.A. Jeffrey, Acta Crystallogr. Sect. B, 33 (1977) 3510. [9] J.A. Kanters, G. Roelofsen, B.P. Alblas and I. Meinders, Acta Crystallogr., Sect. B, 33 (1977) 665.
[lo] H.A. Wells, Jr. and R. Atalla, 3. Mol.. Struct., 224 (1990) 383. [l l] J. Baran, M. Wierzejewska-Hnat, E.T.G. Lutz and J.H. van der Maas, J. Mol. Struct., 244 (1991) 87. [12] J. Baran, M. Wierzejewska-Hnat, E.T.G. Lutz and J.H. van der Maas, J. Mol. Struct., 237 (1990) 355. [13] E. Steinwender, E.T.G. Lutz, J.H. van der Maas and J.A. Kanters, Vib. Spectrosc., 4 (1993) 217. [14] G. Turrel, Infrared and Raman Spectra of Crystals, Academic Press, New York, 1972. [15] J. Giermanska and M. Szostak, J. Raman Spectrosc., 22 (1991) 107. 1161 R.G.J. Miller and H. Willis, Irscot Infrared Structural Correlation Tables, Heyden, London, 1969.