8lOCHEMlCAL
Vol. 99, No. 4,198l April
AND BIOPHYSICAL
RESEARCH
COMMUNICATIONS Pages
30, 1981
POLYAMINES STIMULATE
1361-1368
NATURAL RNA-DIRECTED DNA SYNTHESIS BY RAUSCHER
MURINE LEUKEMIA VIRUS DNA POLYMERASE
1
Received
Stuart
L. Marcus '*,
Memorial
Sloan-Kettering
'Haskins
Laboratories
March
Steven
W. Smith',
Cancer
and Cyrus
Center,
J. Bacchi'
New York
of Pace University,
NY 10021,
New York,
and
NY 10038
18,1981
SUMMARY. In the presence of optimal concentrations of Mg2+, spermine and spermidine were found to stimulate rabbit globin mRNA-directed cDNA synthesis by Rauscher murine leukemia virus (R-MuLV) DNA polymerase. Stimulation of DNA synthesis did not occur with the polyamines putrescine or cadaverine, nor could exogenously provided salt or ammonium ions duplicate the stimulation. Analysis of the mechanism of stimulation showed that inclusion of spermine in reaction mixtures a) increased Vmax and decreased apparent Km with respect to the globin mRNA-oligo(dT) tem$ate-primer complex, and b) decreased the quantity of oligo (dT) required for optimal rates of cDNA synthesis on a fixed quantity of mRNA template. Genomic 70s RNA-directed cDNA synthesis was also stimulated by spermine addition to reaction mixtures, but only at supra-optimal RNA concentrations. Our results suggest that stimulation of R-MuLV DNA polymerase activity by polyamines is primarily due to stabilization of the enzyme-templateprimer initiation complex resulting in increased efficiency of initiation of cDNA synthesis. The relative
inefficiency
mammalian
type
synthetic
template-primers
viral
C retroviral
factors
other
ency of --in vivo cations,
the
been shown systems
and activated
than
reverse
polymerase
both
We report Rauscher
DNA synthesis
by biologically
the stimulatory
*
globin
To whom correspondence
effecters
murine
for
active
for
the
(R-MuLV)
polyamines.
that
or
the effici-
the
organic
since
in various
stimulation
they
have
enzyme
of natural
DNA polymerase-catalyzed
Analysis
spermine
of
cellular
optimizing
in vitro -___
time
by isolated
utilization
that
to investigate
as a template-primer
suggested should
virus
their
of cDNA synthesis
the first
leukemia
mRNA.(dT),2-,B
polyamine
be required
RNA and DNA synthesis here
with suggests
We chose
as possible
to stimulate
rabbit
might
DNA synthesis
compared DNA (l-3)
transcription.
polyamines,
(4-11).
RNA-directed
DNA polymerases
RNA-directed,
using
of natural
of such stimulation complex
acted
and spermine
to increase
as
the affinity
be addressed 0006-291X/81/081361-08$01.00/0 1361
All
Copwrghr 7 1981 r&h/r of reproduc,lion
by Academrc Press, Im,. rn aqy form reserved.
Vol. 99, No. 4,198l
8lOCHEMlCAL
of R-MuLV DNA polymerase decrease
the quantity
synthesis
for
of primer
on a fixed
quantity
R-MuLV 70s RNA-directed inhibitory
in the
to stimulate
absence
molecules
RESEARCH
complex
required
of globin
for
only
optimal
rates
primer
suggest
as to
of cDNA
stimulated
at RNA concentrations
primarily
at the
as well
Spermine
Our results
DNA synthesis
COMMUNICATIONS
lo-fold
mRNA template.
of polyamine.
of cDNA synthesis
MATERIALS
BIOPHYSICAL
template-primer
cDNA synthesis
RNA-directed
of initiation
the
AND
which that
were
spermine
by increasing
the
acts
efficiency
terminus.
AND METHODS
Reagents: (3H)-dTTP and (3H)-dGTP were purchased from the New England Nuclear Co. Unlabeled dNTPs were obtained from P-L Biochemicals, Inc., as was Rabbit globin mRNA was the kind gift of Dr. J. Vournakis of Syracuse (dT)12-18. University. Polyamines as HCl salts were obtained from Sigma Chemicals Co. Purified R-MuLV and avian myeloblastosis virus (AMV) were provided by Dr. J. Cole of the NCI. R-MuLV DNA polymerase was purified as previously described (2). Genomic 70s RNA from R-MuLV or AMV was purified after extraction by velocity sedimentation (1). Rabbit globin mRNA was annealed to (dT)l2-18 at a weight ratio of lO:l, respectively, in 0.05M Tris (pH 7.8) buffer (2). DNA polymerase assays: Reactions were carried out in a total volume of 100 ~1 and contained 50mM Tris-HCl, pH 7.8, 1mM dithiothreitol, 10 ug of bovine serum albumin, and 1mM Mg2+ (as MgC12). Unlabelled dNTPs were present at individual concentrations of 0.2mM and labelled substrate at 10pM. Unless otherwise stated, 1 vg of template-primer complex was used per assay, and reactions were incubated at 370 for 1 hour. Trichloroacetic acid-insoluble radioactivity was then collected on glass fiber filters and quantitated as previously described (2). RESULTS Genomic above, fold
70s RNA-directed
the addition
of substrate
spermine
the stimulation addition
of the
and absence
(Fig.
at RNA concentrations
sence appears
of polyamine. largely
1) revealed
~100 ng per
The stimulation
to be due to negation
to control
assay,
which
were
of 70s RNA-directed of the
1362
inhibition
assays.
The
of 200-500uM,
while
mixtures
stimulation
in >lO-
only
did
not not
RNA concentrations that
shown
provided
up to 2mM (data
to increasing
resulted
addition
concentration
at concentrations response
of spermine
Spermidine
to reaction
conditions
reactions
as compared
at an optimal
or putrescine
DNA polymerase
the reaction
to 70s RNA-directed
was 50uM.
of spermine,
cDNA synthesis,
Under
incorporation
concentration
of cadaverine
stimulate
only
of spetmine
stimulation
optimal
DNA synthesis.
shown).
by spermine
reactions
the
significantly
in the
inhibitory
half
Analysis presence occured
in
the ab-
therefore
of cDNA synthesis
caused
8lOCHEMlCAL
Vol. 99, No. 4,198l
Fig.
1.
Effect of increasing concentrations catalyzed by R-MuLV DNA polymerase Incubation was of 50~M spermine.
by high
RNA concentrations.
"nicks"
observed
productive (Fig.
enzyme binding
degree
Spermine
of interpreting
sites
of uncertain
and for annealed
that
spermine
than
the
in which which
exogenous
to (dT),2-,8
of the
kinetics
as the quantity
led
of
primer
size
analysis
revealed
no difference
finally
in size
samples
and cDNA synthesized
Kinetic
analysis
of the
both
effect
as nonreaction
of cDNA synthesis
cDNA synthesis. internal
a system
could
to
>lO-fold
2B) showed the
initial
were
between
in the presence
of sperm ine with
by spermine,
and analysis
of the
significantly
1363
(data
(250~iM)
and sub-
reaction
as well
increased. incubation
cDNA synthesized
respect
mRNA
complex
at optimal
of spermine
globin
template-primer
15 and 120-minute
distribution
was minimal,
namely
velocity
synthesized cDNA from
that
binding
RNA-directed
isolation
be supplied,
The diffi-
enzyme
of natural
on this
stimulated (Fig.
of globin
rate
70s RNA containing
DNA synthesis
concentrations
However,
initial
mRNA-directed
molecules
the reaction
may serve
70s RNA-directed
of RNA damage during
was also
of product
which
of
of such synthesis.
us to examine
(13-15).
R-MuLV polymerase
spermine
using
virus, of the
the
of globin
the possibility
by the
optimal
stimulated
results number
frozen
Kinetics
extent
COMMUNICATIONS
may be due to the presence
from
(12).
final
as an effector
culty
synthesis
sites
RESEARCH
of genomic 705 RIIA on DNA synthesis in the presence (a) and absence (0) carried out for 30 min. at 370.
Such inhibition
in 70s RNA prepared
2A) showed
a greater
AND BIOPHYSICAL
not
periods in control
shown).
to vary ing mRNA.(dT)12-,8
8lOCHEMlCAL
Vol. 99, No. 4,198l
AND
BIOPHYSICAL
RESEARCH
COMMUNICATIONS
^ ‘0 - 14 x B l2 E 10 E
b a z s6
52
4
*2 -7 Liz -- 0
Fig.
2:
Effect of spermine on the kinetics of DNA synthesis directed by genomic 70s RNA with endogenous primers (A) and rabbit globin mRNA annealed to At all time points gel analysis of cDNA (dT)l2-18 as a primer (B). products revealed no significant quantity of double-stranded DNA synthesis, and the presence of 100 ug/ml actinomycin D in reaction mixtures did not affect the kinetics of DNA synthesis (data not shown).
concentrations
is presented,
The apparent that
in
of
the
mine
in the
Km for
template-primer
the presence
of 25, 50,
reaction
also
appeared
form of a double-reciprocal
plot,
in the absence
was 5.6 ug, while
or 250uM spermine
to
increase
of polyamine decreased
significantly,
to 0.56 but
only
in
Fig.
vg. at
3.
The Vmax
higher
sper-
concentrations. By making
molecules,
use of our
ability
stimulation
initiation
of cDNA synthesis.
to
quantity
a fixed determined
the absence
(250 in
the
of spennine,
to vary
we were
as (dT)12-,8,
nism of polyamine
sis
60 90 120 150 180 210 Minutes at37"
30
ng)
presence
a
able
might
to determine
globin of
various
and
spermine
primer-to-template
of the
1364
(dT)12-,8
initial concentrations
weight
primer
an additional of priming
quantities mRNA
of potential
whether
be the stabilization
Increasing of
the concentration
ratio
rates
mecha-
sites, were of (Fig.
for
annealed cDNA
synthe-
4).
of 10 was required
In
BIOCHEMICAL
Vol. 99, No. 4,1981
AND
pg (globm
Fig.
to
produce
quantities
3.
template
ratio
mRNA + dTlz-lx)
RESEARCH
COMMUNICATIONS
-/
Effect of spermine on the apparent Km and Vmax of the reaction of R-MuLV DNA polymerase-catalysed DNA synthesis with respect to varying globin mRNA.(dT)l2-18 template-primer complex concentration. Final concentrations of the template-primer complex were 0.25, 0.5, 1, 2.5, and 5 vg/lOO ~1. Spetmine was present at a concentration of 0 (o), Results are presented in the form of 25 (o), 50 (A), or 100 (n) PM. a double reciprocal plot.
optimal of
BIOPHYSICAL
rates
spermine was
of present
25-fold
but
synthesis, until lower
at than
this
250nM that
ratio
decreased
spermine
required
in
with
increasing
the
optimal
primer-to-
the
absence
of
spermine.
ng WV,?-,x
Fig.
4.
Effect of spermine on the rate of globin mRNA-directed DNA synthesis in the presence of changing concentrations of (dT)l2-18. Rabbit globin mRNA was present in each assay at a fixed quantity of 250 ng. Incubation was carried out for 30 minutes at 370. Spermine was present at final concentrations of 0 (o), 50 (o), 100 (A), and 250 (A) PM.
1365
Vol. 59, No. 4,19Bl
BIOCHEMICAL
AND
BIOPHYSICAL
RESEARCH
COMMUNICATIONS
Spermme (mM) Fig.
5.
Effect results
Effect of spermine on rates disruoted R-MuLV. Reaction P-40,'which provided optimal total virus used per assay. hour. Control cpm incorporated
of spermine
seen
in the
spermine
caused
synthesis
(Fig.
on endogenous
reconstituted
significant 5),
(2).
as low as 5pM (data
not
synthesis,
at higher
This
inhibition
since
the
(data
not
system
did
(Fig.
l),
out
Inhibition
R-MuLV
at pre-determined was observed
Spermidine
addition
concentrations
than
also
affect
of NP-40 the
caused (data
of polyamine used
of
RNA-directed optimal
spermine
to the
concentrations
at spermine
to be due to interaction
not
In contrast
increasing
of endogenous
of the same quantity
to a reconstituted spermine
shown).
appeared
addition
system
was carried
and Mg2+ concentrations
although
R-MuLV cDNA synthesis.
inhibition
which
of endogenous DNA synthesis by detergentmixtures contained 0.015% (v/v) Nonidet rates of DNA synthesis with.the 2 ug of Incubation at 370 was carried out for 1 = 3,620.
cDNA
detergent concentrations
inhibition not
of DNA
shown).
with
detergent
in the endogenous
previously
observed
reaction
stimulation
by
not shown).
DISCUSSION We have shown mines
spermine
synthesis
at optimal
and spermidine
catalyzed
70s RNA-directed
that,
stimulate
by R-MuLV reaction
divalent
cation
70s RNA and globin
DNA polymerase.
is most
evident
concentrations,
at
1366
the polya-
mRNA-directed
cDNA
that
stimulation
of the
RNA concentrations
which
The fact
inhibit
BIOCHEMICAL
Vol. 99, No. 4,198l synthesis
in the
converting
absence
of spermine
non-productive
mechanism
recently
enzyme
suggested
DNA-directed
DNA synthesis
The addition
of spermine
R-MuLV enzyme for lo-fold,
which
reaction (Fig.
4).
achieved absence
(Fig.
mixtures.
nucleic
polyamine
stabilization
creased
acid
efficiency
Our finding thetic
reactions
(Fig.
5) differs
Virion (20)
It
is
RNA bound already
addition
examining synthesis. functional
from in
the effects This role
approach played
obtained
were in
the
effects
of
the salt
con-
(as ammonium sulfate) effects
ability
of
we have
of spermine
specifically
to this
complex
to endogenous
noted
to
study,
resulting
to
in in-
in a reconstituted structure
cation
native
protein
may provide core
for
the
this
priming block
possibility
structural
and polyamine a greater proteins
1367
proteins addition
understanding in the
DNA synDNA synthesis
reaction
containing
may therefore
examining
purified,
RNA-directed
R-MuLV inhibits
configuration
organic
by virion
by (dT)12-18
by increasing
reviews)
by detergent-disrupted
of such
mRNA-directed
of DNA synthesis.
currently
with
for
and,
at limiting
required
the stimulatory
(16).
approximately
globin
those
the stimulatory
for
a ribonucleoprotein
We are
structures
that
of spermine
results
of an exogenous
than
that
a
of the
of cDNA synthesis
enzyme-template-primer
addition
catalysed
rates
concentration
17-19
affinity complex
the
by
of activated
we observed
less
structure
of initiation
be in an optimal
DNA synthesis. ion core
secondary of the
that
optimal
probable
sites,
of cDNA synthesis
substituted
(see
the
stimulated
Z-fold
may act
DNA polymerases
template-primer
also
ammonium ion
to the well-documented
stabilize
C retroviral
of priming
be even partially
spermine
stimulation
the stimulation
Spermine
COMMUNICATIONS
initiation
increased
must be emphasized
or the
to useful
type
of spermine,
It
(as KCl)
reaction
relate
3).
that
the polyamine
for
concentrations
not
sites
mixtures
the efficiency
at (dT)12-18
centration the
accounts
RESEARCH
1) suggests
mRNA.(dT)12-18
In the presence
could
binding
by mammalian
partially
of spermine.
spermine
(Fig.
to reaction
by increasing
BIOPHYSICAL
to explain
the globin
mRNA concentrations
AND
process
viral
(Fig.
1, 2A).
core
proteinsmay
of cDNA synthesis. sites
used for
The priming
by reconstituting (21)
vir-
and RNA and
on RNA-directed of the
DNA
possible
of proviral
synthesis
Vol. 99, No. 4,19Bl
BIOCHEMICAL
AND
BIOPHYSICAL
RESEARCH
COMMUNICATIONS
ACKNOWLEDGEMENTS The authors express there sincere thanks to Dr. John Vournakis of University for his generous gift of rabbit globin mRNA, to Dr. J. Cole for purified preparations of R-MuLV and AMV, and to Dr. M. J. Modak of Institute for general counsel. We thank Dr. N. Sarkar for his support agement. This work was supported, in part, by NC1 grants CA 18369 and
Syracuse and Gruber this and encourCA 08748.
References 1.
2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13.
2: 16. 1':: 19.
20. 21.
Marcus, S.L., Sarkar, N.H., and Modak, M.J. (1976) Virology 2, 242-254. Modak, M.J., and Marcus, S.L. (1977) J. Biol. Chem. 252, 11-19. Marcus, S.L., Sarkar, N.H. and Modak,-M.mgTBiochim. Biophys. Acta 519, 317-330. Abraham, K.A. (1968) Eur. J. Biochem. !j, 143-146. Wickner, W., Schekman,.,-Gem. and Kornberg, A. (1973). Proc. m. Acad. Sci. USA 70, 1764-1767. Janne,, -Bardin,'--- C.W. and Jacob, S.W. (1975) Biochemistry 14, 3589-3597. Yoshida, S., Masaki, S. and Ando, T. (1976). J. Biochem. 79, 895-901. Evans, J.A., and Deutscher, M.P. (1976) J. -BioT. -Chem. 251, 6646-6652. Barbiroli, B., Masotti, W., Moruzzi, M.S,, Monti, M.G., and Moruzzi. G. (1978) in w. in-Polyamine &. (R:A. Campbell,?Ed.) Vol. 1 pp. 217-229. Raven Fess. New York. Fisher, P.A.*and Korn, D-,(1979) J. Biol. Chem. 254, 11033-11039. Marcus, S.L., Lipshik, G., TruebaT G. and Bacchi3.J. (1980) Biochem. Biopti;;th~.WCom;;rncus~,S :027-1035 Sen, G., and Sarkar, N.H. (1979). Proc. m. 173&1740: -Acad. -*Sci' -USA"76-3 Kacian, D.L., Spiegelman, S., Bank, A., Terada, M., Metafora, S., Dow, L. and Marks, P.A. (1972) Nature New Biol. 235, 167-169. Ross, J., Aviv, H. and Leder,1972) Proc. Natl. Acad, Sci. -USA -3 69 264-268 Verma, I.M., Temple, G.F., Fan, H. and Baltimore, D.(1972rNature ___ -New -*Biol 235, 163-166. Smith, S.W. and Bacchi, C.J. (1981) J. Biol. Chem In Press Marcus, S.L., Cohen, S. (1971) Introduction to the Polyamines. Preme-m','NzKy. Tabor, C.W. and Tabor, H. (1976) Ann. Rev. Biochem. 45, 285-306. --7-Cohen, S.S. (1978) in --Adv. in Polyamine Res. -Campbell, Ed.) Vol. 1, pp. l-10. Raven Press, New York. Marcus, S.L., Smith, S.W., Racevskis, J. and Sarkar, N.H. (1978) Virology 86, 398-412. Marcus, S.L., Smith, S.W., Racevskis, J. and Sarkar, N.H. (1979) 2. m. m. 254, 4809-4813.
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