Journal Pre-proof Polycyclic aromatic hydrocarbons exposure and their joint effects with age, smoking, and TCL1A variants on mosaic loss of chromosome Y among coke-oven workers Yuhang Liu, Yansen Bai, Xiulong Wu, Guyanan Li, Wei Wei, Wenshan Fu, Gege Wang, Yue Feng, Hua Meng, Hang Li, Mengying Li, Xin Guan, Xiaomin Zhang, Meian He, Tangchun Wu, Huan Guo PII:
S0269-7491(19)34568-3
DOI:
https://doi.org/10.1016/j.envpol.2019.113655
Reference:
ENPO 113655
To appear in:
Environmental Pollution
Received Date: 13 August 2019 Revised Date:
10 October 2019
Accepted Date: 19 November 2019
Please cite this article as: Liu, Y., Bai, Y., Wu, X., Li, G., Wei, W., Fu, W., Wang, G., Feng, Y., Meng, H., Li, H., Li, M., Guan, X., Zhang, X., He, M., Wu, T., Guo, H., Polycyclic aromatic hydrocarbons exposure and their joint effects with age, smoking, and TCL1A variants on mosaic loss of chromosome Y among coke-oven workers, Environmental Pollution (2019), doi: https://doi.org/10.1016/j.envpol.2019.113655. This is a PDF file of an article that has undergone enhancements after acceptance, such as the addition of a cover page and metadata, and formatting for readability, but it is not yet the definitive version of record. This version will undergo additional copyediting, typesetting and review before it is published in its final form, but we are providing this version to give early visibility of the article. Please note that, during the production process, errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. © 2019 Published by Elsevier Ltd.
1
Polycyclic Aromatic Hydrocarbons Exposure and their Joint Effects with Age,
2
Smoking, and TCL1A Variants on Mosaic Loss of Chromosome Y among
3
Coke-oven Workers
4 5
Yuhang Liu1 a, Yansen Bai1 a, Xiulong Wu a, Guyanan Li a, Wei Wei a, Wenshan Fu a,
6
Gege Wang a, Yue Feng a, Hua Meng a, Hang Li a, Mengying Li a, Xin Guan a, Xiaomin
7
Zhang a, Meian He a, Tangchun Wu a, Huan Guo a *
8 9
1
These authors contributed equally to this work.
10
Authors’ affiliations:
11
a
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Environmental Health (Incubating), School of Public Health, Tongji Medical College,
13
Huazhong University of Science and Technology, 13 Hangkong Rd, Wuhan, China.
Department of Occupational and Environmental Health, State Key Laboratory of
14 15
Declaration of competing financial interest:
16
The authors declare no competing financial interest.
17 18
* Correspondence to:
19
Huan Guo, MD, PhD, Professor, Department of Occupational and Environmental
20
Health, School of Public Health, Tongji Medical College, Huazhong University of
21
Science and Technology, 13 Hangkong Rd, Wuhan 430030, Hubei, China. Tel: 8627-
22
83657914; Fax: 86-27-83657765; E-mail:
[email protected]. 1
23
ABSTRACT
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Mosaic loss of chromosome Y (mLOY) is the most common structure somatic event
25
that related to increased risks of various diseases and mortality. Environmental
26
pollution and genetic susceptibility were important contributors to mLOY. We aimed
27
to explore the associations of polycyclic aromatic hydrocarbons (PAHs) exposure, as
28
well as their joint effects with age, smoking, and genetic variants on peripheral blood
29
mLOY. A total of 1005 male coke-oven workers were included in this study and their
30
internal PAHs exposure levels of 10 urinary PAH metabolites and plasma
31
benzo[a]pyrene-r-7,t-8,t-9,c-10-tetrahydotetrol-albumin (BPDE-Alb) adducts were
32
measured. mLOY was defined by the median log-R ratios (mLRR) of 1480 probes in
33
male-specific region of chromosome-Y from genotyping array. We found that the
34
PAHs exposure levels were linearly associated with mLOY. A 10-fold increase in
35
urinary 1-hydroxynaphthalene (1-OHNa), 1-hydroxyphenanthrene (1-OHPh),
36
2-OHPh, 1-hydroxypyrene (1-OHP), ΣOH-PAHs, and plasma BPDE-Alb adducts
37
could generate 0.0111, 0.0085, 0.0069, 0.0103, 0.0134, and 0.0152 decrease in
38
mLRR-Y, respectively. Additionally, mLOY accelerated with age, smoking pack-years,
39
and TCL1A rs1122138-C allele, and we observed the most severe mLOY among
40
subjects carrying more than 3 of the above risk factors. Our results revealed the linear
41
dose-effect associations between PAHs exposure and mLOY. Elder male smokers
42
carrying rs1122138CC genotype were the most susceptible subpopulations to mLOY,
43
who should be given protections for PAHs exposure induced chromosome-Y
44
aberration.
45
KEYWORDS: Polycyclic aromatic hydrocarbons; mosaic loss of chromosome Y;
2
46
TCL1A; genetic variations; joint effect
3
47
ABBREVIATIONS: BMI, body mass index; BPDE-Alb,
48
benzo[a]pyrene-r-7,t-8,t-9,c-10-tetrahydotetrol-albumin adducts; CIs, Confidence
49
intervals; GC-MS, Gas chromatography-mass; GWAS, genome-wide association
50
study; HWE, Hardy-Weinberg equilibrium; LD, linkage disequilibrium; LOD, limit of
51
detection; MAF, minor allele frequencies; mLOY, mosaic loss of chromosome Y;
52
mLRR, median Log R Ratio; mLRR-Y, median Log R Ratio of chromosome Y;
53
OH-PAHs, monohydroxy polycyclic aromatic hydrocarbons; PAH, polycyclic
54
aromatic hydrocarbon; QC, quality control; SNP, single nucleotide polymorphism;
55
TCL1A, T-cell leukemia/lymphoma 1A; ΣOH-PAHs, the sum concentrations of ten
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OH-PAHs;1-OHNa, 1-hydroxynaphthalene; 2-OHNa, 2-hydroxynaphthalene;
57
2-OHFlu, 2-hydroxyfluprene; 9-OHFlu, 9-hydroxyfluprene; 1-OHPh,
58
1-hydroxyphenanthrene; 2-OHPh, 2-hydroxyphenanthrene; 3-OHPh,
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3-hydroxyphenanthrene; 4-OHPh, 4-hydroxyphenanthrene; 9-OHPh,
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9-hydroxyphenanthrene; 1-OHP, 1-hydroxypyrene; 6-OHChr, 6-hydroxychrysene;
61
3-OHBaP, 3-hydroxybenzo[a]pyrene.
62 63
MAIN FINDINGS
64
Increased levels of PAHs exposure were associated with more severe mLOY.
65
There were interactive and joint effects of PAHs, age, smoking pack-years, and
66
TCL1A rs1122138CC on mLOY.
4
67
INTRODUCTION
68
Mosaic loss of chromosome Y (mLOY) is the most frequently detectable
69
structural mosaic event than those observed in autosomes and chromosome X among
70
males (Zhou et al., 2016). It refers to a portion of cells losing the Y chromosome,
71
while the remaining retains the normal. The epidemiological studies had observed
72
preliminary evidence suggesting mLOY in blood was moderately associated with an
73
increased incidence of select solid tumors (Machiela et al., 2017; Loftfield et al., 2019)
74
as well as all-cause and non-hematologic cancer mortality (Forsberg et al., 2014;
75
Loftfield et al., 2018). Recent studies had also revealed the possible relationships
76
between mLOY and occurrences of Alzheimer's disease (Dumanski et al., 2016),
77
cardiovascular events (Haitjema et al., 2017), along with autoimmune diseases
78
(Persani et al., 2012). However, these findings were still preliminary and not validated
79
in a substantially larger independent studies (Zhou et al., 2016).
80
Epidemiologic investigations indicated that mLOY could be modified by
81
genetic and environmental factors. A recent published genome-wide association study
82
(GWAS) had comprehensively reported a series of single nucleotide polymorphisms
83
(SNPs) associated with mLOY based on the UK Biobank cohort of 85,542 men
84
(Wright et al., 2017). These findings provided us with mLOY-related genetic
85
variations. Males could develop aggravated mLOY as they getting old. Besides age,
86
the most confirmed environmental risk factor is cigarette smoking. Dumanski et al.
87
conducted a pooled study of 6014 males in Sweden and proposed current smokers
88
showed a higher level of mLOY than non-current smokers, and smoking pack-years 5
89
tended to be positively associated with mLOY, but this association disappeared after
90
smoking cessation (Dumanski et al., 2015). Another investigation regarding the effect
91
of environmental factors on mLOY indicated that exposure to air particulate matter ≤
92
10 µm (PM10) might exacerbate leukocyte mLOY (Wong et al., 2018). Nevertheless,
93
the relationship of other exposures with mLOY has not been adequately investigated.
94
Polycyclic aromatic hydrocarbons (PAHs), known as their highly toxic, are a
95
series of persistent and pervasive organic pollutants generated mainly from
96
incomplete combustion of organic matter (White et al., 2016; Weinstein et al., 2017).
97
Exposure to PAHs is associated with the development of numerous cancers (Lee et al.,
98
2010) and cardiovascular diseases (Yin et al., 2018). Since PAHs are important
99
genotoxic components common to cigarette smoke and particulate matter, both of
100
which are showed to be associated with increased blood mLOY, we hypothesized here
101
that direct PAHs exposure may have a similarly detrimental effect on chromosome Y.
102
Here, we performed a cross-sectional study including 1005 male workers from a
103
coke-oven plant. For all participants, we detected their urinary concentrations of 10
104
PAH metabolites and plasma levels of
105
benzo[a]pyrene-r-7,t-8,t-9,c-10-tetrahydotetrol-albumin (BPDE-Alb) adducts, as the
106
internal exposure biomarkers for PAHs. We genotyped these subjects by using
107
Illumina SNP array, estimated their levels of blood mLOY, and extracted the
108
genotypes of mLOY-related SNPs according to the previous GWAS report.
109
Additionally, the dose-response relationships between PAHs exposure and mLOY, and
110
their joint effects with age, tobacco smoking, and genetic variants were further 6
111
evaluated among these male subjects.
112
MATERIALS AND METHODS
113
Study Subjects
114
A total of 1628 Han Chinese subjects, who had worked in a coke-oven plant in
115
Wuhan city, Hubei, China for more than one year were recruited in 2010. There were
116
1405 males among this population. These subjects were worked at the top, side, and
117
bottom of the coke-ovens, adjunct workplaces (e.g., the blower operation room and
118
recycling work-shops), or in offices. After excluding male subjects with a history of
119
self-reported cancer and without available urinary samples or qualified DNA, the left
120
1005 males were included in this study. The general information on their demographic
121
characteristics, health status (including the disease histories of cardiovascular disease,
122
benign tumors, and diabetes mellitus), lifestyles (cigarette smoking, alcohol drinking,
123
and physical activity), and occupational history were obtained through face-to-face
124
interviews by using a questionnaire. All participants donated 5 mL of venous blood
125
and 20 mL of first-morning urine, which were stored at -80 °C until laboratory
126
examinations.
127
The anthropometric data, including weight and height, was obtained by direct
128
measurement. The body mass index (BMI) is defined as weight divided by squared
129
height (kg/m2). Subjects who had smoked > 1 cigarettes per day for at least 1 year
130
were defined as current smokers; subjects who had ever smoked and quitted for more
131
than half a year were defined as former smokers; otherwise, they were defined as
132
none smokers (Yuan et al., 1997; Yang et al., 1999). Cigarette smoking history of 7
133
pack-years was calculated through multiplying the packs of cigarettes smoked per day
134
by the years of smoking. Those who had drunk alcohol at least once a week for > 1
135
year were defined as current alcohol drinkers; those who had ever drunk and quitted
136
for more than half a year were defined as former alcohol drinkers; otherwise, they
137
were defined as non-drinkers. Those who spent > 20 minutes/day exercise for ≥ 3
138
times per week were considered as regular physical exercisers; if not, they were
139
considered as non-regular physical exercisers. All subjects provided informed consent
140
and this study was approved by the Ethics Committee of Tongji Medical College,
141
Huazhong University of Science and Technology.
142 143 144
Determination of Urinary PAH Metabolites The concentrations of 12 PAH metabolites, including 1-hydroxynaphthalene
145
(1-OHNa), 2-OHNa, 2-hydroxyfluprene (2-OHFlu), 9-OHFlu,
146
1-hydroxyphenanthrene (1-OHPh), 2-OHPh, 3-OHPh, 4-OHPh, 9-OHPh,
147
1-hydroxypyrene (1-OHP), 6-hydroxychrysene (6-OHChr), and
148
3-hydroxybenzo[a]pyrene (3-OHBaP) were determined by using the Agilent
149
5975B/6890N GC-MS System (Agilent, Santa Clara, CA, USA). Details of the
150
method have been described in our previous studies (Kuang et al., 2013). The
151
6-OHChr and 3-OHBaP were excluded in further analyses since their concentrations
152
were below the limit of detection (LOD) among > 90% samples. The detection rate of
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the left 10 urinary PAH metabolites ranged from 85.27% to 100%, and their LODs
154
ranged 0.1~1.4 µg/L. Sample with concentration of each PAH metabolite below LOD 8
155
was imputed with half of the LOD. Urinary levels of creatinine (Cr) were measured
156
by an automated clinical chemistry analyzer. Finally, the concentration of each PAH
157
metabolite was calibrated by urinary Cr and presented as µg/mmol Cr. Sum
158
concentrations of 10 PAH metabolites were recorded as ΣOH-PAHs.
159 160
Determination of Plasma BPDE-Alb Adducts
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The concentrations of plasma BPDE-Alb adducts were detected by using an
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ELISA method with minor modifications (Chung et al., 2010). The specific processes
163
had been described in our previous studies (Kuang et al., 2013). Each standard and
164
sample was analyzed in duplicate. The plasma concentration of BPDE-Alb adducts
165
was represented as ng/mg albumin. The LOD was 1 ng BPDE-Alb adducts per
166
microgram albumin and the values below LOD were imputed with half of the LOD.
167 168 169
Genotyping and Imputation Peripheral blood DNA was genotyped by using the Illumina Global Screening
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Array Multi-Disease (GSA-MD) BeadChip array and analyzed by using
171
high-throughput genotyping apparatus (iScan, Illumina). For expecting
172
high-reliability genotyping results, we conducted a preliminary quality control before
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imputation, excluding SNPs based on the following criteria: (1) with a call rate < 95%,
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(2) Hardy-Weinberg equilibrium (HWE) P < 10-6, and (3) minor allele count < 1, and
175
excluded subjects with a genotyping missing rate > 10%. The imputation analysis was
176
carried out by using Minimac4 with 1000 Genomes Project ALL Phase 3 Release 9
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(05/02/2013) as the reference panel. Then, we filtered variants with minor allele
178
frequency (MAF) ≤ 0.05 or with a low imputation quality (R2 ≤ 0.3). The final
179
genotyping data were obtained according to either direct genotyping or imputation.
180 181 182
Estimation of Mosaic Loss of Chromosome Y To estimate the degree of mLOY for each subject, we calculated median log R
183
Ratios (mLRR, i.e. observed intensity/expected intensity) of 1480 probes in the
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male-specific region of chromosome Y (ChrY: 2655180-59034049, hg19/GRCH37)
185
based on intensity data that recorded by the Genome Studio software. As the total
186
intensity R is proportional to the copy number of chromosome Y, a positive mLRR-Y
187
estimation indicates a gain of copy number of chromosome Y; mLRR-Y estimation
188
close to zero indicates a normal copy number of chromosome Y; a more negative
189
mLRR-Y estimation denotes an increased proportion of leukocytes with mLOY. We
190
applied a rigorous filter criterion by excluding unqualified samples with a call rate <
191
0.97 (n = 25), or with a sex discrepancy (n = 7), or with a Log R Ratio standard
192
deviation on chromosome 1 ≥ 0.28 (n = 19), then the left 954 males were included in
193
the subsequent analysis.
194 195 196
Selection of SNPs Related with mLOY In the GWAS on UK Biobank population, Wright et al. found 19 mLOY-related
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SNPs (Wright et al., 2017). We excluded 5 variants with minor allele frequency < 0.05
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in the Chinese population, and 4 indels those failed in imputation were further 10
199
replaced by 4 SNPs with high linkage disequilibrium (r2 > 0.9). Finally, 14 SNPs,
200
including rs2736609, rs4754301, rs9805742, rs10151519, rs1122138, rs12448368,
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rs11082396, rs13088318, rs6802910, rs56084922, rs13191948, rs381500, rs4721217,
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and rs6468341, were selected in this study. These SNPs were also chosen in another
203
Chinese study (Qin et al., 2019). Additionally, we extracted all SNPs within the region
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upstream and downstream 10Kb of TCL1A gene. After excluding those with an MAF
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< 0.05, HWE P-value < 0.05, or imputation quality (R2) ≤ 0.3, 57 SNPs in TCL1A
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were chosen for further analysis.
207 208
Expression Quantitative Trait Locus (eQTL) Analysis of Positive SNPs
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For the TCL1A SNPs those had significant associations with mLRR-Y, we performed
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the eQTL analysis by using the Genotype-Tissue Expression data (GTEx, version 7,
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http://www.gtexportal.org/home/), in order to explore their regulation influence on
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TCL1A expression in the whole blood.
213 214 215
Statistical Analysis We used the one-sample Kolmogorov-Smirnov test to examine the normality of
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continuous variables. The concentrations of 10 urinary PAH metabolites and the
217
plasma levels of BPDE-Alb adducts were log10 (lg)-transformed to improve their
218
normal distribution. The continuous value of mLRR-Y was used as the dependent
219
variable (y) in the multiple linear regression models to estimate the association
220
coefficient (β) and its 95% confidence interval (95%CI) with each PAH exposure 11
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biomarker, after adjustment for experimental batch in model 1, or additionally
222
adjusted age, BMI, smoking pack-years, alcohol drinking status (current vs.
223
non-current), and physical activity (yes vs. no) in model 2. In these models, the
224
lg-transformed value of each PAH exposure biomarker was separately included in the
225
regression as the independent variable. The corresponding regression coefficient (β)
226
represents that a 10-fold increase in level of each PAH exposure biomarker was
227
associated with β increase in mLRR-Y. For PAH exposure biomarkers that had
228
significant associations with mLRR-Y (P < 0.05), we further used a restricted cubic
229
spline model with knots at its 25th, 50th, and 75th percentiles, to explore the linear or
230
nonlinear shape of the associations. In addition, a sensitivity analysis by excluding
231
participants with self-report diseases of cardiovascular disease, benign tumor, and
232
diabetes mellitus (n = 79), was also performed.
233
The genotypes of each SNP were added in an additive model to assess their
234
associations with mLRR-Y, with adjustment for age, BMI, smoking pack-years,
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current alcohol drinking status, physical activity, lg-transformed levels of ΣOH-PAHs
236
and BPDE-Alb adducts, and experimental batch.
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All study subjects were further categorized into 4 subgroups (Q1 to Q4
238
subgroups, according to the quartile levels of each PAH exposure biomarker. The
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multiple linear regression models with adjustment for above confounders were used
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for computing the relative βs and 95%CIs in Q2, Q3, and Q4 subgroups with Q1 as
241
the reference group. The linear trend P-value was also derived by modeling a
242
numerical value for each category in the models. Then, the study participants were 12
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classified into low (< 75% percentiles of urinary ΣOH-PAHs, Q1 to Q3) and high (≥
244
75% percentiles of urinary ΣOH-PAHs, Q4) PAHs exposure subgroups. We evaluated
245
the interaction effects of age, smoking, and TCL1A rs1122138 with dichotomous
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PAHs exposure on mLRR-Y respectively, where the multiplicative interaction terms,
247
e.g., age (≤ 45, > 45) × PAHs (low PAHs exposure, high PAHs exposure), smoking
248
status (never and ever smoking) × PAHs (low, and high PAHs exposure), rs1122138
249
genotypes (CC, CA+AA) × PAHs (low, and high exposure), were separately included
250
in the multiple linear regression models, with adjustment for the other confounders.
251
The joint effects of dichotomous PAH exposure (low and high exposure level) with
252
dichotomous age (≤ 45, > 45), smoking (never and ever smoking), and TCL1A
253
rs1122138 (CC, CA+AA) on the level of mLRR-Y were further estimated.
254 255
A two-sided P < 0.05 was defined as statistically significant. All statistical analyses were performed in the R software (version 3.4.1).
256 257
RESULTS
258
Demographic Characteristics
259
Among 1005 participants with genotyping, the mean age was 42.6 ± 8.5
260
years-old and the mean BMI was 24.2 ± 3.0 kg/m2. 681 of them (67.8%) were current
261
smokers and there were 45 former smokers (4.5%). The median smoking pack-years
262
for the ever smokers were 16.9. There were 392 current alcohol drinkers (39.0%) and
263
595 (59.2%) never drinkers; approximately half of participants (49.2%) were regular
264
exercisers (Table 1). Additionally, 6.3% (n = 63) of them had a history of diabetes 13
265
mellitus, 1.1% (n = 11) had self-reported cardiovascular disease, and 1.4% (n = 14)
266
had a benign tumor. There were 954 male subjects had qualified value of mLRR-Y,
267
with mean ± SD equal to -0.0035 ± 0.0500.
268
The distributions for levels of PAH exposure biomarkers were shown in Table
269
S1. The median concentrations of urinary ΣOH-PAHs and plasma BPDE-Alb were
270
12.22 (7.95, 19.29) µg/mmol Cr and 4.25 (3.67, 5.00) ng/mg albumin, respectively.
271
Compared to subjects included (n = 1005, with genotyping), those excluded (n = 400,
272
without genotyping) had a lower BMI, more current alcohol drinkers, and a higher
273
urinary level of 2-OHNa. There were no significant differences in distributions of age,
274
tobacco smoking, physical activity, and levels of other PAH exposure biomarkers
275
between the above two populations.
276 277 278
Associations between Covariates and mLRR-Y Age and smoking pack-years were found to be negatively associated with
279
mLRR-Y [β (95%CI) = -0.0004 (-0.0007 to -0.0001) and -0.0002 (-0.0004 to
280
-5.5E-06), P = 0.020 and 0.044, respectively] (Figure S1). Compared to never
281
smokers, former and current smokers showed decreased mLRR-Y, although the
282
associations did not reach significant level [β (95%CI) = -0.0093 (-0.0234 to 0.0048)
283
and -0.0016 (-0.0079 to 0.0046), P = 0.198 and 0.611, respectively]. We did not
284
observe significant associations between other covariates (BMI, drinking status,
285
physical activity) and mLRR-Y (Table S2).
286
14
287 288
Dose-response Relationships between PAHs Exposure and mLRR-Y
289
The association of each PAH exposure biomarker with mLRR-Y was shown in
290
Table 2. It was shown that an each 10-fold increase in levels of urinary ΣOH-PAHs
291
and plasma BPDE-Alb adducts was associated with a separate 0.0134 or 0.0152
292
reduction in mLRR-Y in males [β (95%CI) = -0.0134 (-0.0227 to -0.0041) and
293
-0.0152 (-0.0296 to -0.0009), P = 0.005 and 0.038, respectively], after adjustment for
294
experimental batch, age, BMI, smoking status, alcohol drinking, and physical activity.
295
For each single urinary PAH metabolite, an each 10-fold increase in urinary 1-OHNa,
296
1-OHPh, 2-OHPh, and 1-OHP level could generate a separate 0.0111, 0.0085, 0.0069,
297
and 0.0103 decrease in mLRR-Y (all P < 0.05). The sensitivity analyses, by excluding
298
participants with a history of diabetes mellitus and self-reported cardiovascular
299
disease or benign tumor, did not materially change the above associations (Table 2).
300
Furthermore, the spline curve analyses did not show non-linear associations of above
301
6 PAH exposure biomarkers with mLRR-Y (all P for non-linear association > 0.05),
302
which confirmed the negative linear dose-response relationships (Figure 1).
303
After categorized all subjects according to the quartile levels of each PAH
304
exposure biomarker, males within the highest quartile (Q4 subgroup) of urinary
305
1-OHNa, 2-OHFlu, 1-OHPh, 2-OHPh, 9-OHPh and ΣOH-PAHs had a separate
306
0.0106, 0.0101, 0.0111, 0.0102, 0.0098, or 0.0119 reduction in mLRR-Y, when
307
compared to those within the lowest subgroup (Q1) of each metabolite (all P < 0.05).
308
The significantly increasing trends in mLRR-Y were found for 1-OHNa, 2-OHFlu, 15
309
1-OHPh, 2-OHPh, 4-OHPh, 9-OHPh, 1-OHP, and ΣOH-PAHs (Ptrend < 0.05), and a
310
marginal trend for BPDE-Alb adducts (Ptrend = 0.051), with the exception of 2-OHNa,
311
9-OHFlu, and 3-OHPh (Ptrend = 0.122, 0.227, and 0.076, respectively) (Table S3).
312 313 314
Association between Selected SNPs with mLRR-Y The general information of 14 selected SNPs was represented in Table 3. Among
315
the study participants, the rs1122138 of TCL1A was associated with leukocyte
316
mLRR-Y in an additive manner, with one allele increase in minor allele A resulting in
317
0.0065 increase of mLRR-Y (SE = 0.0031, P = 0.037), suggesting that the
318
rs1122138A allele is the protective allele associated with lower mLOY. But we didn’t
319
find significant associations for the other 13 SNPs (all P > 0.05) (Table 3). Between
320
the upstream and downstream 10Kb region of TCL1A gene, there were 57 SNPs
321
passed the quality control. Among them, additional 9 SNPs surrounding rs1122138,
322
including rs2296312, rs7359033, rs2296311, rs2887399, rs1957937, rs1123245,
323
rs1984968, rs1984967, and rs8012195, were also significantly associated with
324
increased mLRR-Y (all P < 0.05) (Table S4, Table 4). Additionally, all these 9 SNPs
325
showed high linkage disequilibrium with rs1122138 (all D’ = 1 and r2 = 1, except
326
rs7359033 that had D’ = 1 and r2 = 0.703 with rs1122138) among the study
327
participants (Table S4, Figure S2).
328
In order to test the biological roles of above TCL1A variants, we search for the
329
GTEx database and found that the minor alleles of these 10 TCL1A SNPs could all
330
significantly decrease the expression level of TCL1A in the whole blood samples (all 16
331
P < 0.05) (Table 4, Figure S3).
332
Interactive Effects of Age, Smoking, and TCL1A rs1122138 with PAHs on
333
mLRR-Y
334
The significant interaction between PAHs exposure and age was only marginally
335
shown for urinary 1-OHP (P interaction = 0.052), but not for the others (Figure S4). In the
336
stratification analysis by age, the significant association between 1-OHP and
337
mLRR-Y in leukocytes was predominately shown among the elder participants aged >
338
45 years-old [β (95%CI) = -0.0174 (-0.0302, -0.0059), P = 0.004], but not seen for the
339
young participants aged ≤ 45 years-old [β (95%CI) = -0.0053 (-0.0162, 0.0051), P =
340
0.314]. Also, smoking status and rs1122138 genotypes could not modify the
341
association between each PAH exposure biomarker and mLRR-Y (Figure S4).
342 343 344
Joint Effects of Age, Smoking, and TCL1A rs1122138 with PAHs on mLRR-Y It was shown that, compared to low PAHs exposed young workers, the high
345
PAHs exposed elder workers had the lowest level of mLRR-Y [mean: -0.0181 vs.
346
-0.0012, β (95%CI) = -0.0173 (-0.0270, -0.0067)] (Figure 2A). Compared to never
347
smokers with low PAHs exposure, the ever smokers with high PAHs exposure had the
348
highest mLOY (mean mLRR-Y: -0.0103 vs. -0.0002), with a 0.0078 decrease in
349
mLRR-Y [95%CI (-0.0172, 0.0013)] (Figure 2B).
350
Since the rs1122138A allele had a positive association with mLRR-Y in an
351
additive model, we further sub-grouped the study participants into rs1122138 CA+AA
352
and rs1122138 CC genotype carriers. The high PAHs exposed rs1122138 CC carriers 17
353
showed the lowest level of mLRR-Y among the four subgroups, who had a 0.0140
354
(95%CI: -0.0234 to -0.0049) decreased mLRR-Y than low PAHs exposed rs1122138
355
CA+AA genotype carriers (mean mLRR-Y: -0.0077 vs. 0.0069) (Figure 2C).
356
The joint effects of the above 4 risk factors, including > 45 years-old, ever
357
smoking, carrying rs1122138CC genotype, and high PAHs exposure were further
358
explored. There were 345 subjects (36.2%) carrying more than 3 risk factors, and they
359
showed significant lower mLRR-Y than subjects without any risk factor [β (95%CI) =
360
-0.0185 (-0.0343, -0.0031) for 3 and -0.0274 (-0.0452, -0.0090) for 4 risk factors,
361
respectively]. A significant increase trend in decreasing mLRR-Y was also observed
362
among subjects with an increased number of risk factors (Ptrend = 0.001) (Figure 2D).
363 364 365
DISCUSSION To our knowledge, this was the first study to investigate the associations between
366
PAHs exposure and mLOY in peripheral blood. One of our most noteworthy findings
367
is that the internal exposure levels of PAHs showed significantly linear dose-response
368
relationship with leukocyte mLOY. Consistent with previous studies, our results
369
validated the positive correlations of age and smoking pack-years with mLOY, and
370
also revealed the effects of TCL1A variants, marked by SNP rs1122138 among
371
Chinese population. More importantly, we illustrated the joint effects of PAHs
372
exposure with age, smoking, and TCL1A rs1122138 on elevating leukocyte mLOY.
373 374
Known as highly toxic, PAHs can cause great damage to human health. After absorbing by the human body, PAHs can produce reactive oxygen species (ROS) 18
375
during metabolism in vivo, which can induce oxidative damage to the normal
376
structures and functions of DNA and proteins (Pavanello et al., 2013; Grova et al.,
377
2017). In addition, some PAH metabolites (e.g., BPDE) could directly bind to DNA
378
and form DNA adducts, causing chromosome rearrangement. The oxidative damage
379
and DNA adducts induced by PAHs exposure may be two important mechanisms of
380
PAHs exerting effects on mLOY (Mishra et al., 2016).
381
In the present study, we found a linear dose-response relationship between levels
382
of 1-OHNa, 1-OHPh, 1-OHP along with BPDE-Alb adducts and leukocyte mLOY.
383
Similarly, the previous in vitro experiments indicated that naphthalene exposure could
384
destroy body cells and damage chromosome, leading to the formation of micronucleus,
385
chromosome aberration and recombination (Alegbeleye et al., 2017). Phenanthrene
386
exposure could affect the normal function of aromatic compound receptor (AhR) and
387
result in abnormal expression of corresponding genes, thus breaking the immune
388
system (Liu et al., 2013), the basis for maintaining homeostasis and clearing aberrant
389
cells. Exposure to high level of pyrene had been reported to be associated with
390
impaired structure and function of DNA, further causing chromosome heteroploidy
391
(Idowu et al., 2019). Known as highly carcinogenicity and mutagenicity, BPDE is the
392
ultimate metabolite of benzopyrene. The plasma concentrations of BPDE-Alb adducts
393
were reported to be associated with micronucleus frequency in lymphocytes, which is
394
also a marker of chromosome structural damage like mLOY (Ling et al., 2018). Some
395
epidemiological studies had indicated the effects of PAHs on promoting telomere
396
length shortening (Pavanello et al., 2010; Fu et al., 2018) and decreasing the copy 19
397
number of mitochondrial DNA (Wong et al., 2017), which are also both chromosome
398
damage markers. Although lack of epidemiological replication, Dumanski et al. and
399
Wong et al. illustrated that cigarette smoking and PM10 exposure, in which PAHs
400
existed as both important constituents, could exacerbate leukocyte mLOY, making the
401
current association between PAHs exposure and mLOY feasible (Dumanski et al.,
402
2015; Wong et al., 2018). As a known contributor for mLOY, the effect of age has
403
been widely reported. Our study indicated joint effects on accelerating mLOY among
404
the elder workers (aged > 45) with high PAHs exposure, and there was a marginal
405
interaction of age with 1-OHP on mLOY. During the aging process, human
406
antioxidant capacity is generally weakened and cannot eliminate the excess ROS
407
deriving from PAHs metabolism, thus leading to more severe mLOY
408
(Nikolich-Zugich, 2018). More studies are needed to replicate these findings and
409
uncover the underlying mechanisms.
410
Cigarette smoking was the first environmental factor identified to induce mLOY.
411
In the study, we found a significant correlation of smoking pack-years with increasing
412
mLOY, which was in accordance with the previous findings (Dumanski et al., 2015;
413
Zhou et al., 2016; Wong et al., 2018). In this study, the current and former smokers
414
had lower values of mLRR-Y than never smokers, although the statistical differences
415
were not significant. Also, the effects of cigarette smoking on mLOY may be covered
416
up by high levels of occupational PAHs exposure. The results in present study, along
417
with previous reports, illustrated that mLOY is a novel biomarker for chromosome
418
damage and maybe a potential mediator for carcinogenesis caused by PAHs exposure, 20
419 420
aging, and cigarette smoking. Genetic susceptibility loci of mLOY have also been identified. The first
421
genome-wide association study regarded mLOY as a dichotomous variable and
422
observed the first susceptibility locus of TCL1A gene, marked by rs2887399 (Zhou et
423
al., 2016). A subsequent larger GWAS carried out in the UK Biobank cohort of 85,542
424
males used a quantitative mLRR-Y as a proxy for mLOY, replicated the TCL1A locus
425
(marked by rs1122138, in a complete linkage disequilibrium with rs2887399), and
426
identified additional 18 novel loci of genes functioned in cell proliferation and
427
cell-cycle regulation (Wright et al., 2017). Our study, also adopting a quantitative trait
428
for mLOY by calculating the mLRR-Y, is the first one to validate the mLOY-related
429
TCL1A locus, marked by rs1122138, in a Chinese population. Fine mapping of this
430
region indicated that the major allele of rs1122138 and it is highly linkage
431
disequilibrium 9 SNPs, were associated with increased leukocyte mLOY and high
432
TCL1A expression in whole blood. Overexpression of TCL1A was reported to
433
participate in the development of mature T cell leukemia due to the malignant
434
proliferation of hematopoietic stem cell, and can combine with damaging ATM
435
aberrations to potentiate chromosome fragility and rescue the cell apoptosis (Schrader
436
et al., 2018). When we simultaneously considered all reported risk factors of mLOY,
437
including aged > 45, ever-smoking, carrying rs1122138CC genotype, and exposed to
438
high levels of PAHs, we found that a moderate proportion of subjects (36.2%) had
439
more than 3 risk factors, who were also the most susceptible population to had
440
significant mLOY than those with zero risk score. Further protection strategies should 21
441 442
pay more attention to this subpopulation. There are some strengths in the present study. Firstly, we systematically
443
measured 10 kinds of urinary PAH metabolites and plasma BPDE-Alb adducts, which
444
can provide a comprehensive assessment for total external PAHs exposure levels from
445
diverse aspects. Secondly, our study is the first one to reveal the effect of a typical
446
environmental pollutant on male mLOY in a Chinese population and used a
447
continuous proxy for mLOY in the regression models, where the results are of greater
448
statistical significance and more persuasive. Thirdly, the consistency of findings
449
between the present and previous studies improved the reliability and accuracy of our
450
findings. More importantly, besides PAHs, we simultaneously examined the reported
451
mLOY-related SNPs, which allowed the estimate of joint and interactive effects of
452
PAHs with the known risk factors like age, smoking, and genetic variants, providing
453
scientific evidence for identifying susceptible population as well as putting forward
454
corresponding interventions.
455
However, some limitations should not be neglected. Firstly, the present
456
cross-sectional study is difficult to infer the causality. However, the PAH metabolites
457
were the exposure index and the mLOY in leukocytes was acceptable to be the effect
458
outcome, the dose-response relationships, consistency with previous studies, and
459
biological plausibility lend support for causality. Secondly, urinary levels of PAH
460
metabolites had relatively short half-lives and were detected by using a spot urine
461
instead of multiple points or 24 hours’ urine samples. However, the coke-oven
462
workers are long-termly exposed to PAHs contained combustion emissions 22
463
continuously in their working and daily environment, and the PAH metabolites in a
464
single time point urine were also widely used as internal exposure biomarkers in the
465
environmental epidemiological studies (Kuang et al., 2013; Zhou et al., 2018). In
466
addition, since the urinary levels of PAH metabolites were highly correlated (Table
467
S5), which violates the independence assumption, and since the SNPs were chosen a
468
priori from the large-scale population based GWAS study (Wright et al., 2017), we
469
didn’t control for multiple comparisons for the associations. Thirdly, since coke-oven
470
workers are the typical and occupational population who have been long-term
471
exposure to higher levels of PAHs than the general population (Table S6), they would
472
be more likely to see an effect on mLOY, which minimized the generalization of the
473
findings. Fourthly, insufficient sample size of this study to detect interaction with
474
enough power and the lack of independent replication are also important limitations.
475
Further investigations with larger sample-sized populations are needed to verify the
476
current results. Moreover, chromosome abnormalities like X chromosome loss were
477
also common feature in both males and females and found to be associated with many
478
diseases (Invernizzi et al., 2004; Miozzo et al., 2007), so the effects of PAHs exposure
479
on X chromosome loss still warrant further investigations.
480 481
CONCLUSIONS
482
The present study revealed that exposure to PAHs had a linear dose-dependent
483
effect on elevating mLOY in peripheral blood. We validated the associations of age,
484
smoking pack-years, and TCL1A variants (marked by rs1122138) with mLOY, and 23
485
pointed out the joint effects of the above risk factors. Our findings proposed a
486
susceptible population who should be taken special surveillance and prevention for
487
mLOY related diseases. Extensive investigations are warranted to validate these
488
observations and explore the potential molecular mechanisms.
489 490
DECLARATIONS OF INTEREST
491
The authors declare no competing financial interest.
492 493
FUNDING
494
This work was supported by the funds from the National Natural Science Foundation
495
of China [grant no. 81773398, 81722038], the National Key Research and
496
Development Program of China [grant numbers: 2018YFC2000203 and
497
2015CB553403], and the National Youth Top Talent Support Program of China.
498 499
ACKNOWLEDGMENTS
500
The authors would like to appreciate all participants in this study as well as all
501
volunteers for collecting the samples and questionnaires. Y.L, Y.B., H.G. analyzed
502
data and wrote the paper. X.M., M.H., T.W., and H.G. conducted and designed
503
research. X.W., G.L., W.F., G.W., Y.F., H.M., H.L., and M.L. partially provided
504
essential materials. All authors had access to the data, commented on the report drafts
505
and approved the final submitted version.
506
24
507
SUPPORTING INFORMATION
508
Tables and Figures showing the stratified analysis of PAHs exposure with mLRR-Y,
509
as well as smoking pack-years and age with mLRR-Y. In addition, the associations of
510
TCL1A variants with mLRR-Y, the functional annotations of gene variants were also
511
showed.
25
512
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33
Table 1. Baseline characteristics of the study population (N = 1005). Variables
Values
Age (mean ± SD, years)
42.6 ± 8.5
2
24.3 ± 3.0
BMI (mean ± SD, kg/m ) Smoking status, n (%) None
279 (27.8)
Former
45 (4.5)
Current
681 (67.8)
Smoking pack-years [median (25th, 75th)]
16.9 (8.4, 26.7)
Drinking status, n (%) None
595 (59.2)
Former
18 (1.8)
Current
392 (39.0)
Physical activity, n (%) No
503 (50.8)
Yes
487 (49.2)
Self-report cardiovascular disease, n (%) No
991 (98.6)
Yes
14 (1.4)
Self-report benign tumor, n (%) No
994 (98.9)
Yes
11 (1.1)
Diabetes mellitus, n (%) No
942 (93.7)
Yes
63 (6.3)
Leukocyte mosaic loss of chromosome Y
a
mLRR-Y -0.0035 ± 0.0500 Note: Continuous variables were presented as mean ± SD or median (25th, 75th percentiles). Categorical variables were presented as n (%). a The 954 subjects passing the QC process were used to calculate the mLRR-Y values.
34
Table 2. Associations of PAH exposure biomarkers with mLRR-Y in blood leukocytes. Model 1 a Model 2 b PAH exposure biomarkers β (95%CI) P β (95%CI)
Sensitivity analysis c P
β (95%CI)
P
1-OHNa
-0.0120 (-0.0194, -0.0047)
0.001
-0.0111 (-0.0187, -0.0036) 0.004
-0.0119 (-0.0198, -0.0040)
0.003
2-OHNa
-0.0069 (-0.0140, 0.0002)
0.057
-0.0054 (-0.0130, 0.0022)
0.164
-0.0065 (-0.0144, 0.0015)
0.113
2-OHFlu
-0.0052 (-0.0117, 0.0014)
0.122
-0.0056 (-0.0122, 0.0010)
0.095
-0.0064 (-0.0133, 0.0005)
0.069
9-OHFlu
-0.0010 (-0.0043, 0.0024)
0.566
-0.0009 (-0.0042, 0.0024)
0.588
-0.0017 (-0.0052, 0.0017)
0.328
1-OHPh
-0.0085 (-0.0144, -0.0027)
0.004
-0.0085 (-0.0143, -0.0026) 0.005
-0.0092 (-0.0154, -0.0031)
0.003
2-OHPh
-0.0066 (-0.0131, -0.0001)
0.047
-0.0069 (-0.0134, -0.0004) 0.037
-0.0061 (-0.0128, 0.0007)
0.079
3-OHPh
-0.0033 (-0.0087, 0.0021)
0.225
-0.0038 (-0.0092, 0.0017)
0.174
-0.0038 (-0.0094, 0.0019)
0.194
4-OHPh
-0.0025 (-0.0059, 0.0010)
0.161
-0.0025 (-0.0059, 0.0010)
0.161
-0.0031 (-0.0067, 0.0005)
0.089
9-OHPh
-0.0059 (-0.0122, 0.0003)
0.064
-0.0057 (-0.0120, 0.0006)
0.074
-0.0049 (-0.0115, 0.0017)
0.143
1-OHP
-0.0108 (-0.0187, -0.0029)
0.008
-0.0103 (-0.0182, -0.0024) 0.011
-0.0099 (-0.0182, -0.0015)
0.021
ΣOH-PAHs
-0.0144 (-0.0237, -0.0051)
0.002
-0.0134 (-0.0227, -0.0041) 0.005
-0.0144 (-0.0241, -0.0046)
0.004
BPDE-Alb adducts
-0.0159 (-0.0302, -0.0015)
0.030
-0.0152 (-0.0296, -0.0009) 0.038
-0.0167 (-0.0319, -0.0015)
0.032
Note: The lg-transformed concentrations of each PAH metabolite and ΣOH-PAHs were separately included in the linear regression models. a
with adjustment for experimental batch.
b
with adjustment for experimental batch, age, BMI, smoking pack-years, alcohol drinking status, and physical activity. Sensitivity analysis (n = 875) after excluding participants with a history of diabetes mellitus, self-reported cardiovascular disease, or benign tumor. The covariates were the same as in model 2.
c
35
Table 3. The characteristics of selected single nucleotide polymorphisms (SNPs) and their associations with mLRR-Y among the study participants. Associations between SNPs and mLRR-Y in this study b a a a a SNP Location ChrPosID Gene EA/OA AA/AB/BB EAF β SE P rs2736609 1q22 chr1:156202640 PMF1, SEMA4A T/C 104/425/425 0.33 -0.0017 0.0021 0.427 NPAT, ATM, -0.0019 0.0020 rs4754301 11q22.3 chr11:108048541 A/G 177/478/299 0.44 0.361 ACAT1 rs9805742 13q14.11 chr13:41593758 WBP4 A/G 788/156/10 0.91 -0.0041 0.0034 0.223 rs10151519 14q32.2 chr14:101175798 DLK1 G/A 463/404/87 0.70 -0.0038 0.0022 0.078 rs1122138 14q32.13 chr14:96180242 TCL1A C/A 748/193/13 0.89 -0.0065 0.0031 0.037 rs12448368 16q23.2 chr16:81044947 CENPN, ATMIN C/T 57/348/549 0.24 -0.0004 0.0023 0.856 rs11082396 18q12.3 chr18:42080720 SETBP1 C/T 44/344/566 0.23 -0.0018 0.0024 0.463 rs13088318 3q12.3 chr3:101242751 SENP7 G/A 105/395/454 0.32 -0.0019 0.0021 0.368 -0.0008 0.0039 0.839 rs6802910 3q25.1 chr3:150016195 TSC22D2 C/A 4/123/827 0.07 rs56084922 5q22.1 chr5:111061883 NREP G/A 81/394/479 0.29 -0.0004 0.0022 0.854 SMPD2, -0.0014 0.0028 rs13191948 6q21 chr6:109634599 C/T 680/254/20 0.85 0.602 CCDC162P rs381500 6q26 chr6:164478388 QKI C/A 292/476/186 0.56 -0.0019 0.0020 0.335 -0.0019 0.0021 0.353 rs4721217 7p22.3 chr7:1973579 MAD1L1 T/C 220/493/241 0.49 rs6468341 8p12 chr8:30279355 RBPMS C/T 635/287/32 0.82 -0.0020 0.0026 0.434 Abbreviations: EA, effect allele; OA, other allele; EAF, effect allele frequency; SE, standard error Note: AA: effect genotype; AB: heterozygote; BB: other genotype a Detail information was extracted from previous GWAS of 85542 population. b Linear regression analyses, with adjustment for age, BMI, smoking pack-years, alcohol drinking status, physical activity, experimental batch, and the lg-transformed concentration of ΣOH-PAHs and BPDE-Alb adducts.
36
Table 4. The associations of TCL1A variants with leukocyte mLRR-Y among the study participants and TCL1A expression levels in the whole blood (based on the GTEx database). Associations with Associations with mLRR-Y selected TCL1A expression Location Gene region AA/AB/BB MAF SNPs a β SE P βb P rs1122138 rs2296312 rs7359033 rs2296311 rs2887399 rs1957937 rs1123245 rs1984968 rs1984967
chr14:9618024 2 chr14:9617832
intron
CC/CA/AA
0.11
0.0066
0.0031
0.037
-0.15
<0.001
intron TT/TC/CC 0.12 0.0070 0.0031 0.025 -0.15 <0.001 3 chr14:9617552 intron TT/TC/CC 0.09 0.0072 0.0034 0.037 -0.14 0.003 5 chr14:9617817 intron GG/GA/AA 0.11 0.0066 0.0031 0.037 -0.15 0.003 3 chr14:9618069 upstream 161 bp GG/GT/TT 0.12 0.0065 0.0031 0.040 -0.10 0.012 5 chr14:9618136 upstream 826 bp AA/AT/TT 0.12 0.0063 0.0031 0.043 -0.15 <0.001 0 chr14:9618152 upstream 991 bp GG/GA/AA 0.12 0.0063 0.0031 0.043 -0.13 0.005 5 chr14:9618158 upstream 1048 AA/AG/GG 0.12 0.0063 0.0031 0.043 -0.15 <0.001 2 bp chr14:9618197 upstream 1438 CC/CT/TT 0.12 0.0063 0.0031 0.043 -0.15 <0.001 2 bp chr14:9618299 upstream 2465 rs8012195 GG/GA/AA 0.12 0.0063 0.0031 0.043 -0.11 0.012 9 bp Abbreviations: MAF, minor allele frequency; SE, standard error Note: AA: effect genotype; AB: heterozygote; BB: other genotype a Linear regression analyses, with adjustment for age, BMI, smoking pack-years, alcohol drinking status, physical activity, experimental batch, and the lg-transformed concentration of ΣOH-PAHs and BPDE-Alb adducts. b The values of β and P were calculated based on the GTEx database.
37
1
FIGURE LEGENDS
2
Figure 1. The associations between PAH exposure biomarkers and leukocyte mLRR-Y
3
based on the restricted cubic spline function.
4
(A) 1-OHNa; (B) 1-OHPh; (C) 2-OHPh; (D) 1-OHP; (E) ΣOH-PAHs; (F) BPDE-Alb
5
Note: The spline plots were drawn by using 3 knots (25th, 50th, 75th percentiles), while
6
the minimum concentration was used as the reference.
7 8
Figure 2. The joint effects of PAHs exposure with age, smoking status, and TCL1A
9
rs1122138 on leukocyte mLRR-Y.
10
Note: The red solid dot and blue line in panels represent β (95% CI), while the
11
mLRR-Y are represented as mean ± SD.
12 13 14
38
Highlights: Increased levels of PAHs exposure were associated with more severe mLOY. PAHs, age, smoking pack-years, and TCL1A rs1122138CC had joint effects on mLOY. Take precautions against mLOY among elder smokers exposed to PAHs and rs1122138CC.
Declaration of interests ☒ The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. ☐The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: