Proteins involved in vesicular transport membrane fusion M. Gerard
Waters, Princeton
and
Irene C. Griff and James E. Rothman University,
Princeton,
New Jersey, USA
In the past year, new information about proteins involved in vesicular transport has been plentiful. Particularly noteworthy are the complementary findings that Secl7p is required for vesicle consumption in endoplasmic reticulum-to-Go@ transport in yeast and that an analogous activity in mammalian cells, termed SNAP, is required for transport from the cis to the medial cisternae of the Colgi apparatus. Current
Opinion
in Cell Biology
Introduction
formed detailed electron microscopic analysis of a subset of these ER-to-Go@ transport mutants and found that they can be divided into groups that either do, or do not, accumulate approximately 50 nm vesicles that are believed to be intermediates in ER-to-Go@ transport. Specifically, the mutants secl2, secl.3, secZ6, and sec21 (known as class I mutants) do not accumulate vesicles at the non-permissive temperature, whereas the mutants secZ8, secZ7, and sec22 (known as class II mutants) accumulate transport vesicles. In addition, inspection of double-mutant morphology has indicated that class I mutants prevent vesicle accumulation by class II mutants. This epistasis indicates that class I gene products are required for vesicle formation and that class II proteins are involved in vesicle consumption. The interpretation that SeclSp is required for vesicle consumption is in agreement with the linding [ 111 that a protein, N-ethylmaleirnide-sensitive fusion protein (NSF) is the mammalian equivalent of Secl8p [ 121. NSF is involved in consumption (fusion) of Golgi transport vesicles [ 131 and fusion of endocytic vesicles, and is required for ER-to-Go@ transport in a mammalian ER-to-Go@ transport system [ 141.
The mechanism of protein and lipid transit through the secretory and endocytic pathways is of fundamental importance in cell biology. In general, proteins-are transported in vesicles that bud from one membrane compartment and then specifically target to, and fuse with, another [ 11. Several approaches have been used to study this process. Initially, morphological studies [2] defined the problem, and they have been used since to study the compartments involved in transport. Another approach, which has proved very successful, has been to generate and study vesicular tralhc mutants in the yeast Sac&zromyces cerez)biae [3,4]. A third approach has been to reconstitute specific transport steps in vitro [5] and to dissect these systems biochemically. In the last year, each approach has yielded interesting findings, and in one case there has been a contluence of these approaches leading to insight into the mechanism of transport-vesicle consumption, that is, fusion with the target membrane [6-,7-l.
Genetic analysis of vesicle consumption in yeast
production
In addition to the epistatic relationship between the class I and class II mutations, there are genetic interactions within each group [7**]. This was found by noting that although strains that bore single class I or class II mutations were able to grow at the permissive temperature, certain double mutants were inviable under the same conditions. This phenomenon, termed synthetic lethality [15], was only found when both mutations were within the same class. Specifically, secl2, secl3, secl6, and sec23, which are believed to be involved in vesicle formation, exhibited synthetic lethality in five out of the possible six double mutants. Of the vesicle-consumption mutants, secl7 and secl8 double mutants were inviable. Synthetic lethality
and
Genetic analysis of secretion in yeast has shown that some secretion mutants accumulate a membranous organelle (for example, endoplasmic reticulum (ER) or Golgi) at the non-permissive temperature, while others accumulate vesicles, and yet others both an organelle and vesicles [3,4,8]. A number of these mutants block transport of protein from the yeast ER to the Golgi complex [9.,10*]. Recently, Raiser and Schekman [7*-l per-
COP-coat
protein; ER+ndoplasmic PI-phosphatidylinositol;
Abbreviations reticulum; NSF-N-ethylmaleimide-sensitive SNAP--soluble NSF attachment @
Current
Biology
1991, 3:61S-620
Ltd
ISSN
protein; 0955*74
fusion protein; TCN-trans-Colgi
PCyhosphatidylcholine; network. 615
616
Membranes
and suppressor analysis also suggest protein interactions between the Sec22, Betl, and Bosl proteins [ 16*].
Fractionation of the cytosolic required for Golgi transport
components
Vesicular transport through the Golgi apparatus has been ar&ysed biochemically and morphologically and shown to require membrane and cytosolic proteins, as well as ATP and palmitoyl-coenzyme A [ 17*]. Subfractionation of the cytosolic components required for vesicular transport from the cb to the medial cistemae of the Golgi complex in v&-o, has shown that both high ( > 100 kD) and low ( < 100 kD) molecular weight components are required for the reaction [ 18.1. The low molecular weight activity has been purified to homogeneity and found to be composed of a family of proteins of 35,36, and 39 kD. These proteins, each of which is active alone, can bind to Golgi, and in doing so, bind NSF to the membrane [6**,19]. The 35, 36, and 39kD soluble NSF attachment proteins (SNAPS) are termed a-SNAP, @%AP, and y-SNAP, respectively. In agreement with the Snding that NSF acts late in the Golgi transport reaction [ 131, after targeting of the transport vesicle to the acceptor membrane and removal of the vesicle’s coat [20], it has been found that the activity of SNAP is also required late [6-l. (Note that a requirement in vesicle consumption does not preclude a function in vesicle formation.) The connection to the genetic and morphologic studies of Kaiser and Schekman described earlier was made possible by the finding of Clary ef al. [6**] that yeast cytosol could provide SNAP activity in the mammalian system. This allowed the screening of secretion-mutant cytosols in the assay with the result that secl7 mutant cytosol was found to be deficient in SNAP activity; a-SNAP, but not j!ML4P or y-SNAP, was able to complement the defect in xc27 cytosol. The ability of SNAP (i.e. mammalian Secl7p) to bind NSF (i.e. mammakan SeclBp) to the Golgi membrane supports the interpretation that the synthetic lethality exbibited by secl7/sec18 double mutant is a result of the ‘amplification of the defects in the individual mutants when their protein products physically interact [7-l.
Proteins
involved
in vesicle
formation
Another method for analysis of proteins involved in vesicle formation is through production of vesicles using in vitro systems [ 21,22,23*,24*]. These systems bud vesicles from a suitable donor membrane in the presence of ATP and cytosol. Permeablized yeast cells have been used to
this end for production of ER-to-G&j vesicles [23*] and have yielded a crude vesicle fraction that is active, i.e. that can be separated from the donor ER and then targeted to, and fused with, acceptor Golgi. Purification of these vesicles should yield insight into their components. In addition, as the vesicles are active, the requirements for vesicle production (and subsequently for vesicle consumption) can be assessed by fractionation of the cytosolic components required for production and/or by analysis of whether secretory mutant cytosol can drive vesicle production and/or consumption. Two types of vesicles that bud from the tru~Golgi network (TGN) in a polarized cell and are subsequently targeted to either the apical or basolateral plasma membrane domains have been purified in the last year [25*]. Two-dimensional gel electrophoresis of the vesicle proteins in conjunction with Triton X-114 phase partitioning indicated that the two types of vesicles contain common, as well as distinct, components. The common components were postulated to be involved in the general budding and fusion mechanism, whereas proteins specific to one vesicle or the other were suggested to be involved in protein sorting or targeting. Golgi transport reactions accumulate a population of coated vesicles when performed in the presence of the non-hydrolyzable GTP analog, GTP-YS [ 261. These vesicles, believed to be involved in Golgi transport, have been purified after in vitro production from mammalian Golgi [ 221. Although the vesicles bear a cytoplasmic coat, it is not composed of clathrin [ 22,27,28] as is the coat of vesicles that bud from the plasma membrane during endocytosis or from the TGN for delivery of proteins to the lysosome [ 291. Recently, improvements in the purification scheme have allowed Golgi transport vesicles to be obtained with a very simple protein pattern, consisting of pomptides of 160, 110,98, and 61 kD, and a number of lower molecular weight components [30-l. The largest coat proteins are termed a-COP, P-COP, y-COP, and &COP, respectively. The proteins are present on the cytoplasmic face of the transport vesicles and are therefore believed to represent the subunits of the cytoplasmic coat evident on Golgi transport vesicles. One of the coat proteins, P-COP, was previously identified as a Golgi peripheral membrane protein [31] using immunofluorescence and cell fractionation. lmmunoelectron microscopy localizes P-COP to the Golgi complex and associated transport vesicles in vivo and in vitro [30**,32**]. The P-COP cDNA has been cloned and the sequence determined [32-l and it was found that P-COP is homologous to a protein of similar size in clathrincoated vesicles, termed p-adaptin, which is part of a complex that links the clathrin lattice to the underlying vesicle membrane. The sequence homology suggests that pCOP and p-adaptin may have evolved from a common ancestral protein. This raises the exciting possibility that the two known types of coated vesicles, previously believed to be unrelated, may exhibit underlying similarities in structure and assembly.
Proteins
involved
in vesicular
It has been found that P-COP, which has a molecular weight of 110 kD, is present in cytosol in a complex of approximately 6OOkD molecular weight [32**,33**]. This complex, which has been termed ‘coatomer’, has been purified and found to consist of a-COP, P-COP, y-COP, S-COP, and proteins of 36, 35, and 20 kD [33**]. The coatomer represents approximately 0.2% cytosolic protein, an amount similar to that of clathrin in several cell types [34]. Although it has been suggested that the coatomer is required for vesicle formation, this remains to be demonstrated directly. Apart from the requirement for cytosol and ATP in in vitro vesicle-formation reactions, it has been demonstrated that GTP is required for formation of secretory vesicles and immature secretory granules from the TGN
L35.1.
Proteins
transport
and membrane
fusion
membrane [3]. Several of these have been characterized, namely the GTP-binding protein Sec4 [43], and the Secl5 protein [441. Recently, Novick and coworkers (45’1 have described some properties of the Sec2 protein. This protein contains an amino-terminal coiled-coil domain that is essential for vesicular transport in vivq it seems to bind to other polypeptides, possibly through the coiledcoil domain, as the soluble Sec2 protein shows a native molecular mass much greater than that predicted by its polypeptide sequence. sec2 exhibits synthetic lethality with the same group of late-acting set mutants, as do sec4 and secZ5. These Set proteins may be components of the native Sec2 protein complex.
Proteins involved in transport to the vacuole in yeast
involved
In vesicle
consumption
A number of proteins discussed earlier - NSF (Secl8p) and SNAP (Secl7p) - and the product of the SEC22 gene are involved in vesicle consumption. In addition, several reports have indicated that GTPbinding proteins may be involved in the mechanism of vesicle fusion in both the secretory [36*] and endocytic pathways [37*-391 (see review by Goud and McCaffrey, this issue, pp 626-633).
Other proteins transport
involved
in vesicular
The yeast mutant, secl4, has been shown to interfere with protein transit through the Golgi apparatus [3,40]. Recendy, SEC24 has been found to be identical with the gene, PITY, which encodes a phosphatidylinositol (PI)/phosphatidyicholine (PC) transfer protein [41**] that is capable of transfering either PI or PC between lipid bilayers (for review, see Downham, this issue, pp OOO-OOO).The exact role of this protein in transport through the Golgi apparatus remains to be determined. However, it has been suggested that it may be involved in either specilic retrieval of lipid from the Golgi apparatus or delivery to the ER [41*=,42*].
Proteins involved in transport from to the plasma membrane in yeast
Waters, Criff, Rothman
from
the Golgi
Several genetic selections have identified mutants which defme at least 47 complementation groups that are implicated in vacuolar protein sorting ( qs mutants) [ 46.1. These mutants have been characterized according to vacuolar morphology at the non-permissive temperature and many show defects in sorting of soluble vacuolar proteins. These vps mutations, however, also affect cell growth, vacuolar assembly, organellar pH, sporulation, and osmoregulation [46*]. It is not clear if the vacuolar sorting defect is the primary problem or if it is a consequence of these other phenotypes. Sequences of five of the vps genes have been published, with several showing interesting homologies [47*-5l*]. Characterization of the function of these proteins in vacuolar targeting will be facilitated by a recently described in vitro system that reconstitutes this process [52*]. The transport system, which is monitored by the processing of the Golgi form of carboxypeptidase Y to the vacuolar form, requires ATP, a cytosolic fraction, and active processing enzymes in the yeast vacuoles. The Vpsl5,33 and 34 membrane preparations are inactive, while Vpsl5 and 33 cytosolic fractions are active. This is consistent with the membrane association of Vpsl5p and Vps33p.
Conclusion During the past year there have been significant advances in the field of vesicular transport III the future, the combined application of genetics and in vitro biochemical and morphological analyses is certain to provide a more detailed understanding of this fundamental cellular process.
the Golgi
A number of SECgene products are required for movement of proteins from the Golgi complex to the plasma
Acknowledgements MG Waters is a Merck Sharp & Dohme Fellow of the Life Sciences Research Foundation.
617
618
Membranes
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619
620
Membranes mu LM. Vro~ TA, HERMAN PK, Ehot SD: Characterization of Yeast Vps33p, a Protein Required for Vacuolar Protein Sotting and Vacuole Biogenesis. Mol Cell Biol 1990, 104638-4649. Vps33 protein was shown to be a 75kD cytoplasmic protein with sequence similarity to ATPases with two domains, each of which is pmdieted to bind and hydrolyse ATP. 49. .
50. .
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51. .
HERMAN PK. STACK JH, DEMODENA Protein Kinase Homolog Essential the Yeast Lysosome-Like Vacuole.
JA EMR SD: A Novel for Protein Sorting to Cell 1991. G4:425-437.
Vpsl5 was shown to be homologous to the Ser/Thr family of protein kinases. An active Vpsl5p kinase domain is shown to be essential for proper vacuolar protein localization and the phosphorylation of Vpsl5p itself Vpsl 5p contains an amino-terminal myristic acid that may mediate its stable association with a late Golgi compartment and/or vesicles. VIDA TA, GRAH~~( TR, Ehirr SD: In V&o Reconstitution of Intercompartmental Protein Transport to the Yeast Vacuole. J Cell Biol 1990, 2871-2t3B4. Describes an in t&-o assay that monitors transport from the G&i apparatus to the yeast vacuole. Several fpf mutants were examined for their role in this process.
52. .
MG Waters, IC GriR and JE Rothman, Program in Cellular Biochemistry and Biophysics, Rockefeller Research Laboratories, Sloan-Kettering Institute, 1275 York Avenue, New York, New York 10021, USA