The G-quadruplex-stabilising agent RHPS4 induces telomeric dysfunction and enhances radiosensitivity in glioblastoma cells

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The G-quadruplex-stabilising agent RHPS4 induces telomeric dysfunction and enhances radiosensitivity in glioblastoma cells F. Berardinelli a,d,∗,1 , S. Siteni a,b,1 , C. Tanzarella a , M.F. Stevens c , A. Sgura a,d , A. Antoccia a,d a

Department of Science, Università “Roma Tre”, Rome, Italy Department of Hematology, Oncology and Molecular Medicine, Istituto Superiore di Sanità, Rome, Italy Centre for Biomolecular Sciences, School of Pharmacy, University of Nottingham, Nottingham, United Kingdom d INFN Roma Tre, Rome, Italy b c

a r t i c l e

i n f o

Article history: Received 10 June 2014 Received in revised form 21 October 2014 Accepted 24 October 2014 Available online xxx Keywords: G-quadruplex ligands RHPS4 Telomeres Astrocytoma cells Glioblastoma cells Ionising radiations

a b s t r a c t G-quadruplex (G4) interacting agents are a class of ligands that can bind to and stabilise secondary structures located in genomic G-rich regions such as telomeres. Stabilisation of G4 leads to telomere architecture disruption with a consequent detrimental effect on cell proliferation, which makes these agents good candidates for chemotherapeutic purposes. RHPS4 is one of the most effective and wellstudied G4 ligands with a very high specificity for telomeric G4. In this work, we tested the in vitro efficacy of RHPS4 in astrocytoma cell lines, and we evaluated whether RHPS4 can act as a radiosensitising agent by destabilising telomeres. In the first part of the study, the response to RHPS4 was investigated in four human astrocytoma cell lines (U251MG, U87MG, T67 and T70) and in two normal primary fibroblast strains (AG01522 and MRC5). Cell growth reduction, histone H2AX phosphorylation and telomere-induced dysfunctional foci (TIF) formation were markedly higher in astrocytoma cells than in normal fibroblasts, despite the absence of telomere shortening. In the second part of the study, the combined effect of submicromolar concentrations of RHPS4 and X-rays was assessed in the U251MG glioblastoma radioresistant cell line. Long-term growth curves, cell cycle analysis and cell survival experiments, clearly showed the synergistic effect of the combined treatment. Interestingly the effect was greater in cells bearing a higher number of dysfunctional telomeres. DNA double-strand breaks rejoining after irradiation revealed delayed repair kinetics in cells pre-treated with the drug and a synergistic increase in chromosome-type exchanges and telomeric fusions. These findings provide the first evidence that exposure to RHPS4 radiosensitizes astrocytoma cells, suggesting the potential for future therapeutic applications. © 2014 Elsevier B.V. All rights reserved.

1. Introduction

Abbreviations: G4, G quadruplex; TIF, telomere induced dysfunctional foci; GBM, glioblastoma multiforme; ALT, alternative lengthening of telomeres; hTERT, human telomerase catalytic subunit; PCC, premature chromosome condensation; cPDL, cumulative population doubling level; SER, sensitisation enhancement ratio; TRF1, telomere repeat binding factor 1; TRF2, telomere repeat binding factor 2; POT1, protection of telomeres 1; DSB, double strand break; CSC, cancer stem cells. ∗ Corresponding author at: Department of Science, University of Rome “Roma Tre”, Viale G. Marconi 446, 00146 Rome, Italy. Tel.: +39 06 57336337; fax: +39 06 57336321. E-mail address: [email protected] (F. Berardinelli). 1 These authors contributed equally to the work.

Telomeres are protein–DNA complexes that are located at the physical ends of linear eukaryotic chromosomes, and they confer protection against the action of exonucleases and ligases [1,2]. For this reason, telomeres are known to play a major role in the maintenance of genomic stability by preventing inappropriate chromosome end-to-end fusion [3]. Telomere attrition or telomeric dysfunction resulting from the loss of function of shelterin complex proteins [4] lead to cell cycle arrest, senescence, and apoptosis [5]. This makes telomeres and mechanisms involved in the maintenance of their length promising targets for the development of selective molecules for cancer therapy [6–10]. In particular, in the past decade, considerable attention has been focused on telomerase, because the activation of this enzyme

http://dx.doi.org/10.1016/j.dnarep.2014.10.009 1568-7864/© 2014 Elsevier B.V. All rights reserved.

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is crucial in the maintenance of telomeres in most cancer cells [11]. The interest in the use of telomerase inhibitors for therapeutic approaches has decreased due the observation that significant effects on tumour growth were obtained only after long-term drug administration (i.e., months of treatment) and only when the telomeres reached a critical length [12,13]. However, the telomeric structure itself is an appealing target for telomere-binding compounds in short-term treatments. In this respect, G4-ligands, a class of molecules that are able to interact with physiologically occurring G4 (G quadruplex) structures formed by the G-rich overhang of telomeric DNA [14–16] have recently received considerable attention. Telomestatin [17], Braco19 [18] and RHPS4 [19] are just a few examples of this growing class of G4-stabilising molecules proven for their capability to reduce cell growth by rendering telomeres dysfunctional in in vitro and in vivo cancer models [18,20–24]. Furthermore, an additional advantage of G4-ligands is their effect on telomerase-positive cancer cells by destabilising telomere architecture and inhibiting an optimal access of the enzyme at the target site [25] and the telomerasenegative alternative lengthening of telomere (ALT) positive cells [19,26,27]. The pentacyclic acridine compound RHPS4 (3,11-difluoro6,8,13-trimethyl-8H-quino[4,3,2-kl]acridinium methosulfate) is considered one of the most effective and selective G4-stabilising molecules. In particular, RHPS4 causes telomere deprotection in short-term exposure, leading to telomeric fusions, anaphase bridges and cell proliferation blockage [19,21,28]. In long-term exposure, it was found to induce telomerase inhibition and the down-regulation of the human telomerase catalytic subunit (hTERT) gene, telomere erosion, arrest at the G2/M transition and suppression of cell proliferation in cancer cells [19]. Interestingly RHPS4 seems to act preferentially on relatively short telomeres, a condition frequently encountered in cancer cells [19,21,29], although telomere-length independence in brain tumour cells has been recently reported [30]. Overall, RHPS4 has proven very effective in inducing in vitro and in vivo cytotoxicity in a wide panel of tumour cells, including melanoma [21], prostate [23,31], uterus carcinoma [23], non-small lung [31], malignant childhood and adult brain cancer cells [30] and in xenograft tumours [23,31]. An enhanced clinical benefit of the combined treatment of certain anticancer agents with RHPS4 has been demonstrated in published studies. These observations are consistent with the loss of the protective capping status of telomeres mediated by RHPS4, thus leading to a greater susceptibility of cells with shorter telomeres towards different classes of chemical anti-cancer agents [29,31]. Regarding radiotherapy, it should be noted that drugs that could specifically sensitise tumours to ionising radiations, and in particular radioresistant tumours such as glioblastomas (GBM), would greatly enhance our ability to deliver curative doses while avoiding off-target effects. In general, an increased sensitivity to reactive oxygen species [32], the radiomimetic agent bleomycin [33] and ionising radiations [6,7,34] has been shown in cells with dysfunctional telomeres and/or short telomeres. Therefore, telomere dysfunction has been proposed as new a factor in the sensitivity to ionising radiation treatment [35,36]. Furthermore, alterations in telomere maintenance have been shown to interfere with the proper repair of radiation-induced DNA double-strand breaks [37–39]. Here, we assessed the ability of the RHPS4 G4-quadruplex ligand to destabilise telomeres in a panel of astrocytoma (III/IV World Health Organisation (WHO) grade) cell lines. Furthermore, the role of RHPS4 in sensitising cells to ionising radiations has been studied in combined treatments. We focused our attention on astrocytoma cells and in particular on GBM cells, because this tumour shows extreme intrinsic radioresistance and represents the most

common primary brain tumour in humans [40]. Since glioblastoma patients are treated by neurosurgery in combination with radiotherapy, increasing the sensitivity of tumour cells to ionising radiation by targeting telomeres could represent an innovative strategy to improve radiation therapy outcome in these patients. 2. Materials and methods 2.1. Cell lines and culture conditions Unless otherwise indicated, media and supplements for cell culture were purchased from Euroclone (Euroclone, Pero, MI, Italy) and the plasticware was purchased from Corning (Corning Life Sciences, NY, USA). U251MG (Astrocytoma IV WHO grade) and U87MG (Astrocytoma IV WHO grade) cell lines, kindly provided by Prof. D. Bettega (Depth of Physics, University of Milan and INFN and) were originally purchased from Banca Biologica and Cell Factory (Banca Biologica and Cell Factory, Genoa, Italy). T67 [41] and T70 [42] human astrocytoma cells (WHO grade III and IV, respectively) were kindly provided by Prof. G. Lauro (Depth of Sciences, University Roma Tre). AG01522 (PD 18–25) and MRC5 normal human primary fibroblasts (PD 20–25) were purchased from Coriell Institute (Coriell Institute, Camden, NJ, USA). All the astrocytoma cell lines were proven to be telomerase positive based on the results from TRAP-assay (not shown). U251MG and U87MG were routinely maintained in minimum essential medium with Earle’s balanced salt solution (MEM/EBSS) supplemented with 10% foetal bovine serum (FBS), 2 mM lglutamine, 1 mM sodium Pyruvate, 1% non-essential aminoacids, 100 units/mL penicillin and 100 ␮g/mL streptomycin. T67, T70 and MRC5 were cultured in Dulbecco’s modified MEM supplemented with 10% FBS, 2 mM l-glutammine, 100 units/mL penicillin and 100 ␮g/mL streptomycin. AG01522 normal human primary fibroblasts (Coriell Institute) (PD 18-25) were maintained in EMEM/EBSS with 15% FBS, 2 mM l-glutammine, 1% non-essential aminoacids, 100 units/mL penicillin and 100 ␮g/mL streptomycin. All the aforementioned cell lines were maintained at 37 ◦ C in a 5% CO2 95% air atmosphere. 2.2. Chemical compound and treatments The 10 mM stock solution of pentacyclic acridine, 3,11difluoro-6,8,13-trimethyl-8Hquino[4,3,2-kl]acridinium methosulfate (RHPS4) was prepared in dimethyl sulfoxide (DMSO). The drug was always added to the cells 24 h after plating. An appropriate volume of DMSO was employed as the negative control. Drug dilutions were freshly prepared periodically before each set of experiments. 2.3. Proliferation assessment To assess the proliferation capability of cells exposed to increasing concentration of RHPS4, 105 cells were seeded in triplicate in 60-mm Petri plates and cell counts, using the Scepter handheld automated cell counter (EMD Millipore Corporation, Billerica, MA, USA) were determined daily, from day 1 to day 5 of culture. Experiments were conducted in triplicate. 2.4. TIF co-immunostaining Cells were fixed with 4% paraformaldehyde, permeabilized with 0.5% Triton X-100 and blocked in PBS/BSA1%. Samples were then coimmunostained over night at 4 ◦ C, using a rabbit telomeric protein TRF1 antibody (Santa Cruz Biotechnology, CA, USA) in combination with a mouse ␥H2AX antibody (Millipore) or a mouse 53BP1 antibody (Millipore). After washes in PBS/BSA1% samples were incubated with the secondary antibodies (anti-mouse Alexa 546

Please cite this article in press as: F. Berardinelli, et al., The G-quadruplex-stabilising agent RHPS4 induces telomeric dysfunction and enhances radiosensitivity in glioblastoma cells, DNA Repair (2014), http://dx.doi.org/10.1016/j.dnarep.2014.10.009

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and anti-rabbit Alexa 488, Invitrogen). Finally, slides were washed in PBS/1% BSA, counterstained with DAPI and analysed with fluorescence microscopy using an Axio-Imager M1 microscope equipped with a coupled charged device (CCD) camera. The frequency of foci and colocalisation dots per cell were scored in 100 nuclei in at least two independent experiments. 2.5. H2AX immunofluorescence staining in metaphase spreads Cells were treated with 30 ␮M calyculin A (Wako, Osaka, Japan) for 30 min and resuspended in hypotonic solution for 25 min. Cells were the cytocentrifuged at 500 g for 5 min onto clean microscope slides using a Shandon cytospin 3 (Shandon Inc., Pittsburgh, PA, USA). The slides were then fixed with 4% paraformaldehyde, permeabilized in KCM buffer (120 mM KCl, 20 mM NaCl, 10 mM Tris pH 7.5 and 0.1% v/v Triton X-100) and blocked in PBS/BSA 1% for 30 min at room temperature. Slides were incubated with a mouse monoclonal anti-␥H2AX antibody (Millipore) overnight at 4 ◦ C and then exposed to the secondary Alexa 488-labelled donkey anti-mouse antibody (Invitrogen, Life Technologies, Carlsbad, CA, USA) for 1 h at 37 ◦ C. DNA were counterstained by DAPI. 2.6. Collection of chromosome spreads Chromosome spreads were obtained following incubation in calyculin-A (Wako). Spreads of prematurely condensed chromosomes (PCC) were prepared following standard procedure consisting of treatment with a hypotonic solution (75 mM KCl) for 20 min at 37 ◦ C, followed by fixation in freshly prepared Carnoy solution (3:1 v/v methanol/acetic acid). Cells were then dropped onto slides, air dried, and utilised for cytogenetic analysis. 2.7. Quantitative fluorescence in situ hybridisation (Q-FISH) Centromere calibrated Q-FISH staining was performed as previously described [43]. Images were captured at 63× magnification and the telomere size was analysed with ISIS software (MetaSystems, Altlussheim, Germany). Telomere length was calculate as the ratio between the relative fluorescence intensity of each telomere signal (T) and the relative fluorescence intensity of the centromere of chromosome 2 (C), and expressed as percentage (T/C %) [44,45]. At least 20 metaphases in two independent experiments were analysed. 2.8. Irradiation conditions and combined treatments X-ray irradiations were conducted at RT using a Gilardoni apparatus (250 kV, 6 mA) with a dose rate of 0.53 Gy/min. RHPS4 and X-ray combined treatments were performed by treating cells for 120 h with 0.2 ␮M RHPS4 and then irradiating with doses between 0.5 and 6 Gy. 2.9. Flow cytometry analysis For flow cytometry analysis, 106 cells for each samples were collected and washed twice with PBS, fixed dropwise with ice cold ethanol (70%) and rehydrated with PBS. DNA staining was performed by incubating cells for 30 min at 37 ◦ C in PBS containing 0.18 mg/ml propidium iodide (PI) and 0.4 mg/ml DNase-free RNase (type 1-A). Samples were acquired with a Dako Galaxy Flow Cytometer equipped with a 488 nm laser source. Cell cycle analysis was performed using a FloMax v2.4e software. Doublet discrimination was performed by an electronic gate on FL3-Area vs. FL3-Height. Cell cycle analysis were repeated in two independent experiments.

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2.10. Long-term proliferation assessment Cells were grown for 21 days with two intermediate passages after 7 and 14 days of culture. After harvesting cells were counted using a Scepter handheld automated cell counter (Millipore). The cumulative population doubling level (cPDL) after 7, 14 and 21 days was calculated as follows: cPDL = log 2(Nf /N0 ), where Nf is the final cell number and N0 is the initial number of seeded cells. The experiment was repeated four times. 2.11. Colony forming assay To evaluate clonogenic survival, untreated and RHPS4-treated U251MG cells were irradiated with 0.5–6 Gy of X-ray irradiation and then plated at appropriate concentrations in T25 culture flasks in quintuplicate. After 15 days, the cells were fixed/stained with an aqueous solution containing 0.25% (w/v) crystal violet, 70% (v/v) methanol and 3% (v/v) formaldehyde, and they were counted. Only colonies comprised of >50 cells were included in the quantification. For each treatment, the survival fraction (SF) was assessed according to the following formula: SF = number of colonies formed/number of cells seeded. Plating efficiency was represented by the SF in untreated conditions. The results are the mean of four independent experiments. 2.12. Three colour chromosome painting Fixed cells were dropped onto glass slides and hybridised with the XCP painting probes specific for chromosomes 1 (green label), 2 (green and red label) and 4 (red label) (MetaSystems GmbH, Germany) following the manufacturer’s instructions. Metaphases were visualised and captured using an Axio-Imager M1 microscope (Zeiss, Germany). A total of 200 metaphases were analysed for each sample in two independent experiments and aberrations were classified as acentric fragments not associated with any exchange, total exchanges and total chromosome breaks. 2.13. Pancentromeric and telomeric FISH Telomeric/pancentromeric FISH experiments were performed following the aforementioned procedure described for Q-FISH staining with one notable difference; in addition to the Cy3-linked telomeric peptidic nucleic acid (PNA) probe, an Alexa 488-linked pancentromeric PNA probe (Panagene, Korea) was used to label all the centromeres of the cell. Images were acquired at 63× magnification using a Zeiss Axio Imager M1 microscope. A total of 200 metaphases were analysed for each sample in two independent experiments. 3. Results 3.1. RHPS4 effect on cell growth U251MG, U87MG, T67 and T70 cell lines were maintained in culture for 5 days in the presence of 0.05, 0.1, 0.2, 0.5 and 1 ␮M of RHPS4. Two lines of human normal primary fibroblasts (AG01522 and MRC5) used as controls, were exposed to 0.2, 0.5 and 1 ␮M of the drug. RHPS4 treatment inhibited cell growth in a concentrationdependent manner in all of the cells analysed. With the exception of the U87MG cells, which showed a lower sensitivity, all of the astrocytoma cell lines were very sensitive to the G4 ligand. Notably, complete inhibition of cell proliferation was observed at 1 ␮M RHPS4, and a significant decrease in cell growth (Fig. 1A–D) was observed at the lowest concentrations used (0.05 and 0.1 ␮M). The IC50 values calculated at 120 h after exposure to the drug were 0.37, 0.91, 0.2, 0.05, 0.75 and 0.96 ␮M in the U251MG, U87MG, T67, T70,

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Fig. 1. Proliferation assay in GBM cells (A: U251MG, B: U87MG, C: T67, D: T70) and control cells (E: AG01522, F: MRC5) treated for 120 h with RHPS4 concentrations ranging from 0.05 to 1 ␮M. RHPS4 sensitivity as evaluated after 120 h is shown in G (all cell lines) and H (mean of GBM lines versus normal fibroblasts).

AG01522 and MRC5 cell lines, respectively. The response to the increasing RHPS4 concentration, evaluated at 120 h after treatment, is shown in Fig. 1E and F. Interestingly all of the astrocytoma cell lines displayed a higher sensitivity to concentrations lower than 0.2 ␮M than did normal fibroblasts, as shown in Fig. 1E (data from all cell lines plotted) and Fig. 1F (mean astrocytoma cells versus mean normal fibroblasts).

3.2. RHPS4 induces phosphorylation of histone H2AX in astrocytoma cells but not in normal human primary fibroblasts To investigate a possible genotoxic effect of RHPS4, the induction of ␥H2AX foci after the exposure to various concentrations of the compound (0.2, 0.5 and 1 ␮M) was evaluated at time points up to 120 h. Notably normal fibroblasts and astrocytoma cells behave

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Fig. 2. Number of ␥H2AX foci per cell in cells treated with increasing concentrations of RHPS4 (0.2, 0.5 and 1 ␮M) (A: U251MG, B: U87MG, C: T67, D: T70, E: AG01522, F: MRC5). Student t-test, *P < 0.05, **P < 0.01, ***P < 0.001.

differently when exposed to the same RHPS4 concentrations. In particular, at concentration of 0.2 ␮M, 0.5 ␮M or 1 ␮M a time- and concentration-dependent induction of ␥H2AX foci (Fig. 2A, C and D) was observed mainly in GBM cell lines. U87MG cells showed no phosphorylation of histone H2AX in the response to any of the concentrations used (Fig. 2B). These data indicate that DNA damage accumulates in astrocytoma cells concomitantly with increased cell proliferation block/delay. Notably, in both human primary fibroblast lines no H2AX phosphorylation was observed in the first 120 h after exposure to 0.2 ␮M of RHPS4 (Fig. 2E and F). A slight but significant increase in ␥H2AX foci induction was observed in AG01522 6 h after exposure to either 0.5 or 1 ␮M of RHPS4 whereas MRC5 did not show any significant H2AX phosphorylation even in the presence of the highest RHPS4 concentration tested (Fig. 2E and F).

3.3. RHPS4-dependent induction of telomere induced dysfunctional foci (TIF) In addition to the time- and concentration-dependent increase in ␥H2AX foci, we observed a parallel increase in TIF, which is the number of damaged, and thus dysfunctional, telomeres per cell (Fig. 3). Fig. 3A shows images of U251MG cells treated with 0.2, 0.5 and 1 ␮M RHPS4 for 120 h and the corresponding controls. Interestingly colocalisation puncta were observed only in cells exposed to the G4 ligand. To confirm the telomeric localisation of ␥H2AX we performed immunofluorescence to label the phosphorylated form of the H2AX histone in metaphase spreads. As shown in Fig. 3B untreated and 24 h treated U251MG cells did not display a specific localisation of the few observed ␥H2AX foci, whereas after 120 h, the chromosome termini appeared to be specifically damaged as

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Fig. 3. (A) Images of U251MG cells exposed to increasing concentrations of RHPS4 (0.2, 0.5 and 1 ␮M) for 120 h and stained for ␥H2AX (red spots) and TRF1 (green spots). TIF (white boxes) are enlarged to show the colocalisation between telomeres (TRF1) and DNA damage (␥H2AX). (B) ␥H2AX staining in metaphase spreads showing very low or no induction of DNA damage in untreated or in 24 h-treated U251MG cells, whereas a specific signal localisation at chromosome termini (yellow arrows) was obtained after 120 h. Kinetics of ␥H2AX and TRF1 colocalisation in U251MG (C), T67 (D) and T70 (E) cells exposed to RHPS4 (0.2, 0.5 and 1 ␮M). 53BP1 and TRF1 colocalisation in U251MG (F), T67 (G) and T70 (H) exposed to RHPS4 (0.2, 0.5 and 1 ␮M) evaluated after 120 h from RHPS4 exposure. Student’s t-test, *P < 0.05, **P < 0.01.

shown by the localisation of the ␥H2AX signal. The frequency of TIF per cell in U251MG, T67 and T70 cells was quantified and reported in Fig. 3C–E, respectively. In particular, a significant induction of TIF frequency was obtained 24–72 h after RHPS4 treatment, and the values increase over time until 120 h. Data at the 120 h time point were also confirmed scoring TIF as TRF1 and 53BP1colocalised puncta. Of note, the TIF frequency increased significantly independent of the G4 ligand concentration. 3.4. Telomere length analysis and correlation with IC50 Q-FISH experiments indicated a very heterogeneous cellular telomere length in the different cell lines. The values of the basal telomere length were 11.4, 9.1, 7, 3.3, 2 and 1.6 T/C% in the AG1522, T70, MRC5, U87MG, U251MG and T67 cell lines, respectively. No telomere shortening was observed in cells exposed to 0.2 ␮M RHPS4 as assessed after 120 h of treatment (Fig. 4A). A very weak relation was detected between mean cellular telomere length and IC50 (R2 = 0.02) as shown in Fig. 4B. Conversely, a moderate correlation was observed between the fraction of telomeres shorter or equal to 1 T/C% and IC50 (R2 = 0.25) (Fig. 4C). The 1 T/C% cutoff of was chosen arbitrarily to consider the fraction of very short telomeres, and similar results were obtained changing the cut-off to 0 T/C% or 2 T/C% (R2 = 0.32 and R2 = 0.20, respectively). Interestingly, higher cut-off values resulted in worse linear relationships

was (e.g., setting the cut-off at 5 T/C% decreased the R2 to 0.08), indicating that very short telomeres play a role in the response to RHPS4. 3.5. Combined radiation and drug treatment induce cell cycle block/delay in U251MG U251MG cells were selected to be representative of astrocytoma cell lines in combined treatment experiments. Cell cycle effects were evaluated in samples harvested at the 24 and 48 h time points from single and combined treatments (Fig. 5A). No differences in cell cycle phases were detected in samples treated with 0.2 ␮M RHPS4 or 3 Gy X-ray irradiation. Conversely, after combined treatment, cells became significantly arrested in G2-phase. Interestingly G2 -phase accumulation was observed at 24 h, but absent at 48 h after treatment (Fig. 5B). 3.6. RHPS4 and X-ray-combined treatment affects U251MG cell proliferation For long-term growth assay, cells were treated with 0.2 ␮M of RHPS4 for 120 h and then exposed to either 3 or 6 Gy of X-ray irradiation. Cells were grown for 21 days with two intermediate passages after 7 and 14 days of culture (Fig. 5C).

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3.7. RHPS4 treatment increases cellular sensitivity to ionising radiation The intrinsic radiosensitivity of U251MG cells was studied in triplicate experiments by clonogenic survival assay after exposure to X-rays ranging from 0.5 to 6 Gy (Fig. 5D). U251MG exhibit a high radioresistance (survival fraction at 2 Gy = 53%). In cells pretreated for 120 h with 0.2 ␮M RHPS4, we observed a plating efficiency that was 78% of the untreated control. The comparison between survival curves obtained after irradiation alone and after the combined treatment showed a synergistic effect with a surviving fraction at 2 Gy decreasing from 53% in RHPS4 untreated cells to 20% in RHPS4 pre-treated cells (Fig. 5D). The sensitisation enhancement ratio (SER) value, which was calculated using the 10% survival dose of X-ray-irradiated cells pretreated or not with RHPS4, was approximately 1.9. 3.8. Surviving fraction and telomere dysfunction are directly correlated in U251MG cells To confirm the role of telomere dysfunction in the radiosensitisation of U251MG, survival in the presence of 2 Gy of X-rays was evaluated at 24, 48, 72, 96 and 120 h after the RHPS4 addition. Data revealed that the survival of U251MG decreased over time with increasing duration of RHPS4 exposure and a consequent increase in TIF frequency (Fig. 6A). Moreover, the results from surviving fraction experiments showed a very strong inverse correlation (R2 = 0.92) with the telomere dysfunction data (TIF frequency) (Fig. 6B). 3.9. RHPS4 induce a DNA repair kinetics delay in U251MG exposed to X-rays U251MG cells treated with 0.2 ␮M RHPS4 for 120 h were exposed to 1 Gy. Afterward, cells were immediately returned to the incubator and then harvested at different recovery times (0.5, 2, 6 and 24 h). The data indicated that RHPS4-treated cells displayed a slower DNA repair kinetics than the cells exposed to the radiation alone. In particular, a significant difference in the remaining fraction of either ␥H2AX or 53BP1 foci was observed at 6 and 24 h after X-ray exposure (Fig. 7A). Notably, no changes in DNA repair kinetics were observed in the normal primary fibroblasts (data not shown). 3.10. Combined treatment increases chromosomal exchanges, and in particular dicentrics, in U251MG cells

Fig. 4. (A) Telomere lengths in cells treated with 0.2 ␮M RHPS4 for 120 h (grey columns) and in untreated controls (white columns). (B) Relationship between the mean telomere length per cell and the IC50 . (C) Relation between the fraction of telomere ≤1 T/C% and IC50 . Telomere length is expressed as T/C%, that is the ratio between telomere relative fluorescence intensity and centromere of chromosome 2 relative fluorescence intensity.

Exposure to X-rays reduced U251MG cell growth in a dose dependent manner (16% and 56% reduction at 3 and 6 Gy, respectively) without exerting a cytostatic effect. Notably, exposure to 0.2 ␮M RHPS4 alone had no significant effect on growth of U251MG cells (10.9 and 10.8 cumulative population doubling (cPDL) at day 21 for 0 ␮M and 0.2 ␮M, respectively). Conversely, the RHPS4 and X-rays combined treatment was always more effective than Xrays alone in reducing cellular proliferation (i.e., 39% reduction in 0.2 ␮M + 3 Gy and total cell proliferation block in 0.2 ␮M + 6 Gy).

The results obtained from chromosome painting analysis revealed that exchanges involving chromosome 1, 2 and 4 were higher in the combined treated samples (0.6 exchanges/cell) than in the samples exposed solely to X-rays (0.35 exchanges/cell) or RHPS4 (0.05 exchanges/cell). Conversely, excess fragments remain unchanged in ionising radiation-exposed samples independently of the presence of RHPS4 treatment (Fig. 7C). Moreover, the number of dicentrics and telomere fusions was higher in the combined treated samples (1.46 cell−1 and 0.33 cell−1 , respectively) than in the RHPS4 untreated samples exposed to 3 Gy (0.74 cell−1 and 0.001 cell−1 , respectively) (Fig. 7F). 4. Discussion RHPS4 is considered one of the most effective and selective G4-stabilising molecule. It cause telomere deprotection and inhibition of cell proliferation in several types of cancer cells [21,23,31]. Very recently, the anti-tumour effectiveness of RHPS4 was demonstrated in adult and child brain tumour-derived cells as a proof-of-concept for the use of G4 ligands in brain tumour

Please cite this article in press as: F. Berardinelli, et al., The G-quadruplex-stabilising agent RHPS4 induces telomeric dysfunction and enhances radiosensitivity in glioblastoma cells, DNA Repair (2014), http://dx.doi.org/10.1016/j.dnarep.2014.10.009

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Fig. 5. (A) Cell cycle analysis of U251MG cells after single and combined treatment. (B) Percentage of cells blocked in G2 phase in the first 48 h. (C) Long term growth assay in untreated cells and cells treated with RHPS4 and exposed to 3 and 6 Gy of X-ray irradiation. (E) Colony forming assay in cells exposed to 0.5–6 Gy of X-ray irradiation in the presence (black squares) or absence (white circles) of 0.2 ␮M RHPS4. Student t-test, *P < 0.05, **P < 0.01.

chemotherapy [30]. Consistent with these data, our experiments indicate that adult astrocytoma cell lines showed a higher sensitivity to RHPS4 than normal fibroblasts. Cell growth experiments showed that glioma lines displayed an average IC50 value that was more than twofold less than normal fibroblasts. This suggests a tumour cells’ specificity for RHPS4 or other G4 ligands as indicated in previously published papers [27,28]. Interestingly, astrocytoma cells exhibited significant cell growth inhibition in short time treatments and at concentrations lower than 0.2 ␮M that were tolerated very well by normal cells. The reduction in cell proliferation was accompanied by the induction of DNA damage, as assessed by immunostaining of the phosphorylated form of histone H2AX. A five day follow up of the cell lines exposed to 0.2, 0.5 and 1 ␮M RHPS4 indicated that three out of four astrocytoma cell lines activated DNA damage response in a concentration- and time-dependent manner. Notably, no consistent ␥H2AX induction was observed in normal fibroblasts. Among the astrocytoma cell lines, the only cell line showing an IC50 comparable to normal fibroblasts was the U87MG cells. Consistent with the low sensitivity, we did not observe any H2AX phosphorylation in U87MG cells, whereas phosphorylation normally occurred after exposure to ionising radiation (data not shown). This excludes a deficiency in the H2AX phosphorylation pathway, as reported in

the literature [46] and confirmed in our laboratory. Previously published papers indicate that sensitivity to RHPS4 inversely correlates with telomere length [19,29] which reveals interesting therapeutic possibilities in tumours that possess short or undetectable telomeres [29]. However, recent findings in paediatric brain tumour cells tuned down this aspect, unlinking mean telomere length and RHPS4 sensitivity [30]. Our data failed to define a robust correlation between mean telomere length and RHPS4 effects (Fig. 4B) however, a moderate correlation was detected when considering the fraction of very short telomeres (defined as ≤1 T/C%) regardless of the mean cellular telomere length (Fig. 4C). In this respect it should be noted that only a few uncapped telomeres can activate cell cycle arrest and/or apoptosis [47,48]. Consequently, mean cellular telomere length can be a misleading parameter that is much less informative than chromosome-specific telomere length, for the characterisation of the telomeric status of a cell [6,49]. A possible explanation of the resistance of U87MG cells to RHPS4 is that they possess a fraction of very short telomeres that are comparable to those found in normal fibroblasts and lower than that observed in other astrocytoma cells. Analysis of TIF indicates that histone H2AX phosphorylation occurs primarily place at telomeres, and it follows the same kinetics of ␥H2AX. Moreover, metaphase ␥H2AX immunostaining

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corroborates this evidence, indicating that RHPS4-induced DNA damage is specifically located at chromosome termini. To exclude the contribution of stalled replication fork at telomeres [50], 53BP1 and TRF1 co-immunostaining was performed, indicating the activation of non homologous end joining (NHEJ). These data are in agreement with previous published studies [28,51] and the demonstrates the ability of RHPS4 to specifically drive the 3 -overhang degradation and to dislocate TRF2 and POT1 proteins, thus destabilising telomeres. Interestingly the lowest RHPS4 concentration used (i.e., 0.2 ␮M) was able to induce telomere dysfunction in the first 120 h of treatment. The use of a drug to induce telomere dysfunction represent an intriguing possibility not only for chemotherapy [8,52,53] but also for possible radiosensitisation as proposed by Merle and coworkers using the TAC G4 ligand [54]. In the past decade, telomere dysfunction has been related to radiosensitivity in in vitro and in vivo models [35,55]. The mechanism underlying acquired radiosensitivity in cells displaying short telomeres could be the interference of dysfunctional (and thus sticky) telomeres with radiation-induced double strand break (DSB) repair [38,39] or an epigeneticdriven telomere-dependent chromatin compaction phenomenon [37]. To test the radiosensitising effect of the RHPS4 agent, we established a combined treatment of 0.2 ␮M RHPS4 for 120 h (duration in which we observed the higher induction of TIF) followed by Xray exposure. Combined treatment were tested on U251MG cells, which were used as a model radioresistant GBM cell line. Analysis of the cell cycle indicated that the combined treatment strongly activate a transient G2 -phase block, which was completely resolved at 48 h. Specifically, G2 -phase block prevented cells from entering into mitosis in the presence of DNA damage. The observed transient accumulation in G2 -M after irradiation of pretreated cells indicates a highly damaged cell population that can explain, at least in part, the radiosensitising effect of RHPS4 at the cellular level. We did not observe any significant apoptosis induction, in the time-frame analysed in our experimental set-up. Aside from the block in cell cycle, we observed a reduced proliferation in cells exposed to combined treatment (0.84 and 0.61 of the untreated control in 3 Gy and 0.2 ␮M + 3 Gy, respectively) with a total block after exposure to 6 Gy X-rays. Notably, the results obtained from surviving fraction experiments were of the same magnitude, indicating a synergistic increase in U251MG radiosensitivity after RHPS4 pretreatment. The 2 Gy-surviving fraction, which is the dose used daily in the standard care treatment of GBM patients, was 2.5-fold lower in RHPS4 pretreated sample than in the samples exposed only to the radiation, whereas the SER calculated at 10% survival was approximately 1.9. This result is of considerable interest, especially when considering the observed synergistic behaviour in a type of tumour known for its radioresistance. In this respect it should be noted that standard therapeutic procedures in GBM patients are based on surgery followed by the concomitant administration of radiotherapy and Temozolomide (TMZ), which is an alkylating agent, that increases the effect of ionising radiation in an additive fashion [56]. To confirm the role of uncapped telomeres in the radiosensitisation effect, the 2 Gy-surviving fraction was analysed at different times from RHPS4 pretreatment up to 120 h. The results indicate a marked role played by TIF in the enhancement of radiation sensitivity (R2 = 0.92). The observed effects on cell cycle, proliferation and survival were supported by defects in DNA repair and chromosomal damage. The DSB repair kinetics were delayed by pretreatment with the G4 ligand. Specifically, significant delay in the disappearance of either ␥H2AX or 53BP1 foci were observed at 6 and 24 h after the irradiation. Conversely, no significant changes in the DSB repair kinetics were observed in normal fibroblasts (data not shown). This could be explained by the fact that the presence

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Fig. 6. (A) In the first 120 h after RHPS4 treatment, the fraction of cells surviving 2 Gy of X-ray irradiation decreases, whereas the number of dysfunctional telomeres (TIF/cell) increases. (B) Number of TIF/cell and SF in response to 2 Gy showed a very strong inverse correlation (R2 = 0.925), indicating a greater sensitivity to X-rays in cells bearing a higher number of TIF.

of dysfunctional telomeres, which interfere with DSB repair, can frequently create an odd number of reactive ends that cannot be re-joined and remain unrepaired for longer periods [38,39]. An alternative possibility could rely on a telomere-dependent epigenetic mechanism that leads to increased chromatin compaction and hence to reduced DNA repair protein accessibility to lesion sites [37]. Consistent with an impaired DSB-rejoining, chromosomal analysis revealed a higher frequency of exchanges in the combined treatment samples compared to the X-ray-treated samples. On the contrary, the frequency of excess fragments remained unchanged. This evidence is in agreement with dysfunctional telomere-driven chromosomal instability in which reactive chromosome ends do not generate acentric fragments [57]. In addition, to better characterise the role of dysfunctional telomeres in the observed chromosomal rearrangement a pancentromeric and telomeric FISH stain was performed. The data indicated that combined treatment increased dicentric and telomeric fusion frequency to a greater degree than what was expected after observing contribution the of RHPS4 and X-rays given as independent treatments, hence providing cytogenetic evidence for the observed synergistic effect.

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Fig. 7. (A) DNA repair kinetics as evaluated by the disappearance of ␥H2AX and 53BP1 foci. (B) Representative images of cells stained for ␥H2AX after 0.5, 2, 6 and 24 h from single or combined treatment. (C) Frequency of chromosome exchanges and fragments in cells treated with X-rays and/or RHPS4. (D and E) Representative images of metaphase spreads stained for chromosome 1 (green) 2 (green and red) and 4 (red). Normal metaphase (D) in which there are three copies of chromosomes 1, three copies of chromosomes 2 and two copies of chromosomes 4. Two marker chromosomes M1 and M2 were present in all the metaphases that were scored but were ignored in the analysis. (E) Example of a metaphase carrying a dicentric chromosome (red arrow). (F) Frequency of dicentrics, tricentrics and telomeric fusions in single and combined treated samples. Examples of telomeric fusions in two dicentric chromosomes (G and H) and in a tricentric chromosome (I). Student t-test, *P < 0.05, **P < 0.01.

5. Conclusions The present work proposes, for the first time, that the G4-ligand RHPS4 is a potential radiosensitiser in GBM radioresistant cells. Moreover, a direct relationship between drug-mediated telomere dysfunction and radiosensitisation was shown. This highlights the important role that telomere dysfunction-inducing compounds could play in radiotherapy.

We are currently testing the efficacy of the proposed combined treatment in GBM cancer stem cells (CSC). CSC are a subpopulation of chemoresistant [58] and radioresistant [59] GBM cells that display the unique feature of self-renewal and multi-lineage potency [60], and they are thought to be involved in cancer recurrences [61]. Encouraging results have been recently published showing that the G4-ligand Telomestatin disrupts telomere architecture in GBM CSC reducing cell growth in vitro and in vivo [22]. In conclusion,

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