Translational control of gene expression in the human brain

Translational control of gene expression in the human brain

Prog. Neuro-Psychophormocol. & Biol. Psychiat. Printed in Great Britain. All rights reserved 1989, Vol. 13. pp. 469-479 TRANSLATIONAL NIKLAS Copyr...

623KB Sizes 0 Downloads 99 Views

Prog. Neuro-Psychophormocol. & Biol. Psychiat. Printed in Great Britain. All rights reserved

1989, Vol. 13. pp. 469-479

TRANSLATIONAL

NIKLAS

Copyright

CONTROL OF GENE EXPRESSION HUMAN BRAIN

LANGSTROM';' ANDERS

1. Department

ERIKSSON' WALLACE"

BENGT

WINBLAD:

0

027&5846/89 $0.00 + so 1989 Pergamon Press plc

IN THE

and

WILLIAM

of Psychiatry Sinai School 2. Department of Geriatric 3. Institute

and Fishberg Center for Neurobiology, Mount of Medicine, New York, N.Y. Medicine, Karolinska Institute, Huddinge, Sweden for Forensic Medicine, University of Umea, Sweden

(Final fcrm, Auqnst 1988)

Contents

1. 2. 3. 4.

Abstract Introduction: Experimental Approaches to Investigating Translational control of Gene Expression in the Human Brain Characterization of Polysomes from Human Postmortem Tissues Conclusions Acknowledgements References Abstract

Langstrom,Niklas, Anders Erikson, Bengt Winblad, and William Wallace: control of gene Translational expression in the human brain. Prog. Neuro-Psychopharmacol and Biol. Psychiat. 1989, J&469-479 1. Translational control is the regulation of protein synthesis as an efficiency of mRNA translation and is a common alteration in the mechanism by which cells regulate gene expression. 2. Alterations of total protein synthesis are often the responses of stimuli including starvation, viral infection, cells to various stress and heat shock. Numerous specific genes including ferritin heavy chain, tubulin, 3. proto-oncogene have also been shown to be under the Ick vimentin and translational control. intact organisms, Unlike cultured cells or the investigation of 4. human brain requires the measurement of control in the translational protein synthesis, especially polysomes. Therefore, we components of and characterized polysomes from human postmortem brain have purified purified tissues and compared them to polysomes from the adult rat brain. The yield (as A260 units per gram brain tissue), size (as number of 5. translational efficiency message), ribosomes per (as amount protein ability to reinitiate (as amount of synthesized per A260 unit), and all initiation inhibitors) were protein prevented by synthesis human polysomes compared with as exhibited by the significantly lower rat polysomes synthesized human and polysomes. However, the the rat similar polypeptides. differed from the rat polysomes 6. the human polysomes Thus, principally in the efficiency of mRNA translation which is likely due to

469

469 470 471 473 473 477 478

N.

470

the greatly synthesis.

reduced

Key Words: translation

human

Abbreviations:

ability

of the human

brain,

polysomes,

Translational

control

alteration

in

the

mechanism

by

which

et al.

19861.

specific

1978; Nilsen Pensiero and

protein

often

1971;

19861. of secreted

also

use

translational

of such during

of the && Protein

synthesis

in

or

protein

translational

activities efficiencies

of

is

mRNA

are (Fig

involved may

be

addition,

and

polysomes

of the protein

et al.

synthetic

et

1980;

such as the

[Walter

heavy

et al. of

mRNA

reported. chain

as a

the syntheses

19871, eIF-2,

19861,

19871,

al.

has been

tubulin,

1983; et al.

al. 1978;

regulation

genes

and vimentin

and

the expression

either

the rates

19883. by

altering

polysomal 1).

the

the sizes, determine machinery.

fraction

and therefore, To

in regulating

dynamically

In

et

processes

proteins

redistributing

that

synthesis

synthesis

experiments.

regulated

or by

mRNA

control

rate of protein chase

[Marth et al.

stimuli al.

[Farrell

Jen

for ferritin

and Thomas,

et

Storti

The

as

protein

1978; Schneider,

1969;

[Hentze

proteins

[Thomas

or elongation

1982;

specific

in the

total

Calzone

metabolic

gene

of

1985,

and overall

to variousstress

et al.

control.

to iron dosages

can be

al.

a common

differences

infection

membrane

human

mammalian

mitogenesis

ribosomes

engaged

the

proto-oncogene

initiation total

normal

integral

for numerous

include

response

et

Penman,

translational

ubiquitous early

and

efficiency

examples

reversible

However,

viral

is

as an

[Moldave, either

subtle

1983;

Hacket

and

involves

of cells

19621,

1985;

and

Alterations

Etchison

[McCormick

synthesis

Such

mRNA

synthesis

expression

or more

Hershey,

McCarthy, 1982;

Lindquist,

19861

and

Lucas-Lenard,

shock

translation

control

synthesis

responses

[Howe

et al.

and

heat

protein

mRNA,

synthesis,

of protein

gene

polypeptides. the

starvation al.

mRNA

Translational

of

et

regulation

of

synthesis

Henshaw

the

regulate

total

are

is

cells

of

including

protein

to initiate

Xntroduction

efficiency

alteration

synthesis

polysomes

'I-methyl guanosine triphosphate ['l-methyl GTP]; messenger RNA [mRNA]; polyacrylamide electrophoresis [PAGE]; gel sodium lauryl sulfate [SDS] 1.

Hershey

Langstrom et al.

determine gene

levels the

of either actively whether

expression,

characterized

of

the

by pulse-

and translational distribution

and

Translational control ofgeneexpression inthehuman brain

471

TRANSLATION , Il,,-i," ,. l.-"l.,lll (// 8-w /// /. ,m.,,,, .i--..",,.i,ii ,B_"/"/ /m""1/ li___q iRIBOSOMBS i il POST-TRANSLATIONAL 1 PROCESSING il I POLYSOMAL iIU3ly f mRNA synthesized $

TRANSCRIPTION

Gene

-mRNA

polypeptid -

mature protein

re-initiation

Fig

1.

Controls

of gene expression

2. Experimental Approaches to Investigating Translational Control of Gene Expression Expression in the Human Brain However,

translational

characterized pulse-chase

experiments

amino

into

acids

synthesis

in

from such represent

studies

mRNA

the cellular prot,ein.

brain

shown

components the

[Johnson

regulation

of

total

proteins.

The purification

be

is protein

cannot

not amenable

uptake

be to

of radio-labeled

control

of protein

investigated

with

the

can be isolated

and characterized

et al.,

Because

of synthesizing

characterization

is

(Fig 2).

that most directly

efficiencies both

active

must

that mRNA

tissues

brain

human tissue

Therefore,

and polysomes

in the process

Thus,

translational

cells.

human

have

postmortem

the brain

require

which

of mRNA

in

Postmortem

individual the

characterization Earlier

control

so directly.

of

19861. proteins

reflect polysome

fundamental synthesis

of physiologically

for and

polysomes

id situ,

gene

they are

expression

sizes,

amounts

investigating that

relevant

into and the

of individual

polysomes

472

A.

lPOLYPEPTIDE$ (l**uWuPRECIPltAllOWs

MRNA (NORTHERNS)

AUTO

RADIOGRAPHI)

B.

Fig 2. Investigating VS. Tissues fBf

translational

requires

that

they

polysomal

mRNA

in the

polysomes

need

addition,

the polysomes

tissue

are

so that valid

representative

brain

to be

control:

tissue

physicslIg must

at

intact

Intact

of the

time

(A)

actively of

may be made

y

isolated

between

translated

isolation.

and translationally

be reproducibl

comparisons

the

cells

from

various

active. tissue

The In to

conditions.

473

Translational controlof gene expressionin the human brain

3. Characterization of Human Postmortem The

purification

capable been

of

previously

samples were

was

have

Campagnoni

been

and

many

of

the

age,

agonal

determine

for

investigating

for

(as

neuronal

synthesize

various

ages

in

two

variables,

Cytosolic significantly yield

per

activity

per

of

unit

and did

yield

or

et

isolated values

al.,

tissue

polysome

Polysomes

and from

translational human frontal

(A260

Yield units/g

Activities cortices

tissue)

t,he

to

human

(2.5-fold

(8-fold

of to

order

and size

ability

to

reinitiate. that

as

were

of

postmortem significant

any

activity

human

in

various

exhibit

from

fraction

tissue,

brains

underwent not

whole

a

function

of

submitted].

from

compared

to

as

rat

[Campagnoni from

mRNA),

mRNA

1964; avoids

variations.

used

yield

each

rat

such

from

isolated

human

translational

TABLE Yields

adult

al., brain

tissues

were

of

from

et

tissue

as

polysomal

years) hours)

starting of

of from

[Langstrom

higher gram

capability

18-94

polysomes

brain

with

polysomes

A specific

the

compared

number

the

genetic

polysomes

has

the

rat

isolated

cytosol,

associated

3-14

either

were

isolated

(range: (range:

differences these

and

individual

the

within

of

human

those

of

to

polysomes

use

with

tissue assay

polysomes

[Zomzely The

control.

localized

polysome

intervals

to

translational

ribosomes

proteins

Cytosolic

and

polysomes

The of

times,

and

contrast,

inherent

polysomes

However,

brains)

19721.

suitability

the

those

19671.

number

brain

postmortem

translation

19811.

In

are

postmortem

to

enrich

al.,

brain

vitro

different

Murthy,

that

human

brains

Mahler,

et

from

human

in

investigated

1967;

complications

polysomes,

an

(three

thoroughly

state,

from

in

characterized.

brain

total

[Marotta

small

Mahler,

compared

polysomes

proteins

extensively

not

have

total

reported

analyzed

brains

We

of

synthesizing

Polysomes Tissues

Table

exhibited

cortex

frontal increase)

increase,

brain

whole

rat

and

in

I).

I of Cytosolic and adult rat

Polysomes isolated whole brain.

Translational Activity dpm (35)S-methionine ulos (per A260 Unit)

Human

1.63

(t 0.3) n=lO

695

Rat

4.22

(t 1.7) n=ll

5,770

(t212) n=lO (t650) n=S

both

translational

N.Langstrom etal.

474

In

Analysis

of

brain

largest

rat

polysomes

size

the

centrifugation whole

the

addition,

distribution that the

indicates

include

up

from the human

polysomes

ribosomes brain

than human

sucrose

by

polysomes

15-20

to

larger

were

sizes

contain

density

exhibited message,

per

polysomes. gradient by the rat whereas

5-6 ribosomes

the

per mRNA

(Fig 3).

Rat whole brain

Human FC

Fig 3. Polysomes Profiles Polysomes from Rats

The

ability

investigated vitro

of

using

translation

to differ

the a well

assay.

between

the rat

incubation

which

polysomes

synthesize

and human the

indicates

factor

under

to

characterized

throughout

decrease

translation

Tissues

rabbit

The time course

For the rat polysomes, greatly

of Rat vs Human

the

of

that there

these

synthesis

(Table 2

polypeptide

entire

60 minutes

was no exhaustion

incubation

conditions.

Larger

polypeptides

reticulocyte

of protein

polysomes

rate

Indicating

lysate

was in

was found

).

synthesis

did not

of the translation of any necessary Protein

synthesis

Translational control of geneexpression inthehuman brain

TABLE Time course of rat and absence or presence of either methyl GTP) or an inhibitor are presented as percentage JsS-methionine compared with 60 minute incubation.

30 min

73%

53%

60 min

100%

57%

by the same amount minutes synthesized support period,

(Table

rat

of

the polysomes

to

was

was capable then

of mRNA

synthesis

of only were

GTP

by minutes

specific

rat

that the initial

at

all the human

elongation

inhibitor,

anisomycin

by

initiate

60-80%. new rounds

translation

Despite rat

assay

of nascent

these and

It may

whereas

the human

polypeptide

differences human

synthesis

in yield,

polysomes

of protein 19771.

and the human These by the

synthesis

is due

On the other

hand,

both

rat

15 minutes

polysomes

The

significantly

and human

that the rat polysomal after

and

synthesis

protein

decreased

mRNA

chain

(Table 2 ).

complexes.

be concluded

of protein

period

of protein

polysome

ribosome-mRNA

of

in the presence

was

any time

15 minutes

the polysomal

and Rose,

polysomes

was a

translation

inhibitor

of the incubation

inhibited

could

polypeptide

1976; Lodish

the

itself

the 15 minute

the ability

translated

15

being

various

whether

after

were

polysomes

Therefore, under

were

a

et al.,

beyond

human

of the nascent

of existing

the synthesis

the

7-methyl [Hickey

and nearly

the

To determine

polysomes

complete

system

synthesis

synthesis

synthesis

20%

polypeptides

themselves.

protein

15

90%

by

run-off

synthesis

vitro

after

100%

translation

the

the polysomes

only slightly

82%

was essentially

translation

direct

92%

additional

protein

rat and human

suggest

rat polysomes to the

of

polypeptides

inhibited

results

no

Because

of completing

polysomes

can

2 ).

analog, cap initiation

synthesis

polysomes

that

investigated.

reinitiate,

the

of human

this cessation

conditions

human polysome-directed translation in the an inhibitor of initiation (100 mM 7of elongation (10 mM anisomycin). Results of total trichloracetic acid-precipitable uninhibited rat or human polysomes after a

polysome-directed

characteristic

2

16%

indicating

475

mRNA

in the in

can only complete

chains. size,

synthesized

and translational a

similar

size

abilities, range

of

476

N. Langstrom etal. polypeptides by

as

determined

SDS-polyacrylamide

fluorography

by

gel

separation

of total

electrophoresis

and

translation

products

visualization

by

(Fig 4).

Products of Rat (R) and Human (HI POlySOmeS SS Pig 4. Translation Comparison of free (left) vs membrane (right) separated by SDS-PAGE. Polysome products

4. Conclusions In conclusion,

intact

reproducibl. y purified When compared

and from

to polysomes

translationally various purified

human from

active

polysomes

brain

postmortem

rat whole

brains,

have been tissues. the human

477

Translational control of gene expression in the human brain

were

polysomes smaller polysomal

polypeptides

of

mRNA

However,

efficient

similar

size

range

that

the polysomes

(summarized

in Table

2

TABLE Summary

comparison

ability

the human

indicates

a

which

polysomal

less translationally

is in turn, due to the lower

to reinitiate.

mRNA

polysomes

and

smaller which

sizes,

as

due to the

of

polysomes

thoae

the human synthesized

synthesized

contain

by rat

similarly

sized

.).

3

of rat and human

polysomes

RAT POLYSOMBS

HUMAN

Whole

Frontal

Brain

Cortex

Yield:

4.2 A260

Size:

15-20 ribosomes/message

5-6 ribosomes/message 60s and monosomes prominent

Translational Efficiency:

5,770 dpm assproteins/A260 unit

695 dpm assproteins/A260

Reinitiation:

40% of proteins made by reinitiated mRNA

10% of proteins made by reinitiated mRNA

Polypeptides Synthesized:

Similar sizes SDS-PAGE)

Similar sizes SDS-PAGE)

The human control

brain

when

Polysomes

assay

individual unique

such

because

expression

during

in

synthesized of genes

gene

expression

various

brain

protein

control

translation into

tissue

in

the

the

will these

(by

conditions.

may

synthesis

proteins,

to

unit

via translational

be used

to

order

to

in

human

of polysomal

polypeptides specific

units/g

neuropathological

postmortem

translational

expression

1.7 A260

(by

overall

the in vitro

of gene

newly

regulates

from human

alterations

characterize

direct

stressed

isolated

determine

addition,

likely

units/g

POLYSOMES

brain.

mRNA

In

is the most

characterization

identify

various

the altered

of or

neuropathological

conditions.

Acknowledgements The authors in obtaining

gratefully tissues.

acknowledge In

addition,

the assistance we

express

of Christer appreciation

Gezelius to the

N. Langstrom etal.

478

Swedish

Medical

Research

Stohnes

Foundations

was

recipient

a

Medical

Research

French

Foundation

Council,

of Sweden of

a

Council

and

the

and the Mack

Visiting

Scientist

and is currently

for Alzheimer's

Gamla

Tjanarkvinnor

Foundation. Fellowship

a Fellow

William

and

Wallace

from the Swedish

of the

John Douglas

Disease.

REFERENCES

CALZONB, F.J., ANGERER, R.C. and GOROVSKY, N.A. [1983]. Regulation J. Biol. Chem. 258, 6887-6898. Protein Synthesis in Tetrahymena.

of

Isolation and Properties 119671. Biochemistry 5, 956-967.

of

CAMPAGNONI, Polyribosomes

A.T. and MAHLER, H.R. from Cerebral Cortex.

MILBURN, S.C., ETCHISON, E., BDERY, I., SONENBERG, N. and HBRSEY, J.W.B. [1982]. Inhibition of HeLa Cell Protein Synthesis Following Polio Virus with the Proteolysis of a 220,000Infection Correlates dalton Polypeptide Associated with Eucaryoitc Initiation Factor 3 and a Cap Binding Protein Complex. J. Biol. Chem. 257, 14806-14810. Dubus, L., SLATTBRY, E. and SEN, G.C., RATNER, M.F., FARRELL, P.J., Interferon Action: Two Distinct Pathways for LENGYEL, P. [1987]. Proc. Natl. Inhibition of Protein Synthesis by Double-Stranded RNA. Acad. Sci. [USA] 75, 58993-5897. HACKETT, P.B., EGBBRTS, Ascites and Mengovirus Uninfected and Mengovirus Biochem. 83, 341-352. HENSHAW, E.C., Control of Protein Ribosome Activity.

and E. RNA in Infected

[1978]. TRAUB, P. Translation of Fractionated Cell-Free Systems from Erlich-Ascites Tumor Cells.Eur. J.

HIRSCH, C.A., MORTON, B.E. and HIATT, H.H. [1971]. Tissues Changes in Synthesis in Mammalian through J. Biol. Chem. 246, 436-446.

HENTZE, M.W., ROVAULT, T.A., CAUGHMAN, S.W., DANCIS, A., HARFORD, J.B. and KLAUSNER, E.D. [1987]. A a-acting Element is Necessary and Sufficient for Translational Regulation of Human Ferritin Expression in Proc. Natl. Acad. Sci. [USA] 84, 6730-6734. Response to Iron. M.B. HERSHEY, J.W., DUNCAN, B.R. and MATHEWS, Control, Cold Spring Harbor Publishing Co., Cold 1-19. HICKEY, E.D., WEBER, Initiation of Protein Proc. Natl. Acad. Sci. HOWE, Levels Rates.

[1986]. Translational Spring Harbor, NY, pp.

119761. Inhibition of L.A. and BAGLIONI, C. Synthesis by 'I-methyl guanosine 5'-monophosphate. [USA] 73, 19-23.

Initiation Factors and Ribosme J.G. and HERSHEY, J.W.B. 119831. Controlled in E. Coli Growing at Different are Coordinately J. Biol. Chem. 258, 1954-1959.

JEN, G., BIRGE, C.H. and THACH, R.E. Virus Rates of Encephalomyocarditis Activity. J. Virol. 27, 640-647.

Comparison [1978]. and Host Protein

on Initiation in Ribosome

FINCH,C.E. Extensive and [1986]. MORGAN, D.B. JOHNSON, S.A., Postmortem Stability of RNA from Rat and Human Brain. J. Neurosci. Res. l6, 267-280. LINDQUIST, S. 1151-1191.

55,

[1986].

The Heat

Shock

Response.

Ann.

Rev. Biochem.

Translational

control of gene expression in the human brain

479

Relative Importance of 'I-methyl LODISH, H.F. and ROSE, J.K. 119771. guanosine in Ribosoae Binding and Translation of Vesicular Stomatitis Virus in RNA in Wheat Germ and Reticulocyte Cell Free Systems. J. Biol. Chem 252, 1181-1188. MARTR, J.D., OVERBLL, R.W., MEIBR, R.B., Activation (19881. Translational R.M. Nature 332, 1'71-173.

KREBS, B.G. of the j&

and PERLMUTTER, Proto-Oncogene.

MAROTTA, C.A., BROWN, B.A., STROCCHI, P., BIRD, B.D. and GILBERT, S.M. In Vitro Synthesis of Human Brain Proteins Including Tubulin [1981]. and Actin by purified Postmortem Polysomes. J. Neuroohem 3&, 966-975. , B.J. 11962j. The Effects of Magnesium Starvation ~CC~TRY Biochem. Biophys. Acta 65, 886-888. Ribosome Content of 3. Coli. MCCORMICK, W. and PENMAN, S. [19691. Regulation of Protein in WeLa Cells: Translation at Elevated Temperatures. J. Mol. 315-333. MOLDAVE, 64, 1109.

K.

[1985J.

MURTKY, M.R.V. Cerebral Cortex.

Eucaryotic

C19721. J. Biol.

Protein

Free and Chem. 241,

Synthesis.

Membrane-Bound 1936-1943.

on the

Synthesis Biol. 9,

Ann. Rev. Biochem Ribosomes

of Rat

and BAGLIONI, NILSEN, T.W,, MARONEY, P.A. C. [19821. Inhibition of Protein Synthesis in Reovirus-Infected HeLa Cells with Blevated Levels Interferon-Induced Protein Kinase Activity. J. Biol. Chem. 257, of 14593-14596. Evidence for the PENSIERO, R.N. and LUCAS-LRNARD, J.M. [19851. Presence of on Ribosomes in Mouse L Cells Infected with an Inhibitor Mengovirus. J. Virol. 56, 161-171. Impact of Virus Infection SCHNEIDER, R. t19871. Ann. Rev. Biochem. 56, 317-332. Synthesis.

on Host

RICH, A. and PARDUE, STORTI, R.V., SCOTT, M.P., Translational Control of Protein Synthesis in Response to D. melanogaster Cells. Cell 22, 825-834.

Cell Protein M.L. Heat

[1980f. Shock in

Translational Control of mRNA THOMAS, G. and THOMAS, G. [19861. Bxpression During the Early Mitogenic Response in Swiss Mouse 3T3 Cells: J. Cell Biol. 103, 2137-2144. Identification of Specific Proteins. HANSEN, W. and GARCIA, P.D. [19861 WALTER, P., SIEGEL, V., Cold Spring Harbor Publishing Co., Cold Spring Translational Control, Harbor, NY, 158-161. D. [19641. Regulation ZOMZELY, C.B., ROBERTS, S. and RAPAPORT, Cerebral Metabolism of Amino Acids. J. Neurochem Il, 567-582.

Inquires

and reprint

requests

Dr. William Wallace Department of Psychiatry Mount Sinai School of Medicine New York, NY 10029

should

be addressed

to:

of