Human Immunology 78 (2017) 758–761
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Nomenclature for factors of the HLA system, update July 2017 ⁎
T
Compiled by Steven G.E. Marsh , for the WHO Nomenclature Committee for Factors of the HLA System
The following sequences have been submitted to the Nomenclature Committee since the June 2017 nomenclature update and, following agreed policy, have been assigned official allele designations [1]. Full details of all sequences will be published in a forthcoming report. Below are listed the newly assigned sequences (Table 1) and confirmations of previously reported sequences (Table 2). The accession number of each sequence is given and these can be used to retrieve the sequence files from the EMBL, GenBank or DDBJ data libraries. Although accession numbers have been assigned by the data-libraries and most sequences are already available, there is still the possibility that an author may not yet have allowed the sequence to be released; in such a case you will have to contact the submitting author directly. Additional
information pertaining to new sequences is often included in the publications describing these alleles; a listing of recent publications that describe new HLA sequences is given in Table 3. An additional 1056 alleles were recently published but have not been included in Table 3 due to space considerations [2]. The sequence DQB1*03:01:01:13 was been shown to have been named in error and was identical to DQB1*03:01:01:07. The name DQB1*03:01:01:13 has been abandoned. All new and confirmatory sequences should now be submitted directly to the WHO Nomenclature Committee for Factors of the HLA System via the IMGT/HLA Database using the sequence submission tool provided [3]. The IPD-IMGT/HLA Database may be accessed via the World Wide Web at: www.ebi.ac.uk/ipd/imgt/hla.
Table 1 New sequences. HLA Allele
Cell identification
Accession number
Submitting author
A*01:01:01:11 A*02:01:01:27 A*02:07:10 A*02:695 A*02:696N A*02:697 A*03:283N A*11:01:01:07 A*11:01:78 A*24:02:01:14 A*24:02:103 A*24:14:01:03 A*24:385 A*24:386 A*26:146 A*29:104 A*30:120 A*33:03:01:02 A*33:131 B*07:297 B*07:298
AN00832 T7527 16ZZN003 4541300416 016367651 4551500201 46273 APA 4521000369 PE117 016323904 NT01443 4510905804 4541000210 4510801149 016328558 4551500409 HOR 6331300825 59233 60793104
LT795516 LT629255 LC278464 MF403098 LT883530 MF434849 LT883662 LT629245 MF403092 LT629254 LT883523 MF382091 MF403090 MF403094 MF403089 MF419696 MF434850 LT795523 MF149935 MF279067 MF407538
Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Li-Qun Zhang, Beijing, China Xin Li, Harbin, China Sarah Colom, La Tronche, France Xin Li, Harbin, China Marcel GJ Tilanus, Maastricht, The Netherlands Steven GE Marsh, London, United Kingdom Xin Li, Harbin, China Steven GE Marsh, London, United Kingdom Sarah Colom, La Tronche, France Carolyn K Hurley, Washington DC, USA Xin Li, Harbin, China Xin Li, Harbin, China Xin Li, Harbin, China Sarah Colom, La Tronche, France Xin Li, Harbin, China Steven GE Marsh, London, United Kingdom Zhanhui Du, Qingdao, China Runying Tian, Durham, USA Antonio Balas, Madrid, Spain (continued on next page)
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Address for correspondence: Professor Steven G.E. Marsh, Anthony Nolan Research Institute, Royal Free Hospital, Pond Street, London NW3 2QG, United Kingdom E-mail address:
[email protected]. URLS: http://www.hla.alleles.org, http://www.anthonynolan.org/hig, http://www.ebi.ac.uk/ipd/imgt/hla.
http://dx.doi.org/10.1016/j.humimm.2017.10.014
Available online 31 October 2017 0198-8859/ © 2017 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.
Human Immunology 78 (2017) 758–761
S.G.E. Marsh Table 1 (continued) HLA Allele
Cell identification
Accession number
Submitting author
B*13:104 B*13:105 B*13:106 B*18:131:01:02 B*27:02:01:04 B*39:129 B*39:130 B*40:01:02:06 B*50:54 B*52:21:02 B*53:01:13 B*55:86 B*56:54 B*57:91 C*01:02:01:06 C*03:02:02:04 C*03:02:17 C*07:109:02 C*08:154 C*12:215 C*12:216 F*01:01:02:07 DRB1*01:02:13 DRB1*03:141 DRB1*07:81 DRB1*13:241 DQB1*02:02:01:03 DQB1*02:102 DQB1*03:01:01:19 DQB1*03:02:01:05 DQB1*03:02:01:06 DQB1*05:155 DQB1*06:02:01:04 DPA1*02:09 DPA1*03:01:02 DPA1*04:02 DPB1*105:01:01:05 DPB1*126:01:01:02 DPB1*665:01
4521201332 4541300033 4531400317 016349326 FH06 60785043 THC69 TH119 scu22540 4511501069 49797 4541400620 4541300195 BST89 HOM-2 FH08 5771600971 2049485 H170329 HG00013126 016324668 IBW9 016333837 1924-1178-3 1740-1644-4 16ZZ1046 BY01502 BST79 BY01499 BY01500, BY01501 BY01497 16ZZN005 BY01498 H4D1 H2F3 H1A8 DKMS-LSL-DPB1-1629 DKMS-LSL-DPB1-1635 HGL00013
MF403093 MF403095 MF434847 LT883526 LT629248 MF346805 MF370582 LC257725 MF346804 MF434846 MF358696 MF434848 MF403097 MF399459 LT795522 LT629247 MF362997 MF457651 MF437350 MF142101 LT883527 KY704501 LT883531 MF069232 MF069233 LC278462 MF417572 MF461285 MF417568 MF417570 MF417573 LC278463 MF417566 MF285076 KY807146 KY807145 LT718967 LT718973 KY809063
Xin Li, Harbin, China Xin Li, Harbin, China Xin Li, Harbin, China Sarah Colom, La Tronche, France Steven GE Marsh, London, United Kingdom Antonio Balas, Madrid, Spain Wei Tian, Changsha, China Takashi Shiina, Isehara, Japan Francisco de Paula Sanchez Gordo, Malaga, Spain Xin Li, Harbin, China Francisco de Paula Sanchez Gordo, Malaga, Spain Xin Li, Harbin, China Xin Li, Harbin, China Francesc Rudilla, Barcelona, Spain Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Faming Zhu, Hangzhou, China Antonio Balas, Madrid, Spain Faming Zhu, Hangzhou, China Histogenetics, Ossining, USA Sarah Colom, La Tronche, France Mehdi Alizadeh, Rennes, Frances Sarah Colom, La Tronche, France Yuxin Yin, Los Angeles, USA Yuxin Yin, Los Angeles, USA Li-Qun Zhang, Beijing, China Carolyn K Hurley, Washington DC, USA Francesc Rudilla, Barcelona, Spain Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Li-Qun Zhang, Beijing, China Carolyn K Hurley, Washington DC, USA Yvonne Thorstenson, Mountain View, USA Yvonne Thorstenson, Mountain View, USA Yvonne Thorstenson, Mountain View, USA DKMS Life Sciences Lab, Dresden, Germany DKMS Life Sciences Lab, Dresden, Germany Rasmi Thomas, Silver Spring, USA
Table 2 Confirmatory sequences. HLA Allele
Cell identification
Accession number
Submitting author
A*01:01:02 A*01:03:01:02 A*01:17 A*02:01:01:08 A*02:01:09 A*02:04 A*02:16 A*02:17:02 A*02:18 A*02:19 A*02:21 A*02:34 A*02:86:01 A*02:137 A*02:291 A*02:686 A*03:06 A*03:07:01 A*11:01:02 A*11:248 A*23:11N A*24:02:01:08 A*24:02:01:12 A*24:02:43 A*24:31 A*24:35
NT01453 NT01430 NT01431 BER NT01454 RML TUBO LZL NT01432 NT01433 NT01434 NT01435 NT01436 NT01441 MOV002AN 016345223 NT01437 NT01438 NT01457 NT01439 NT01442 DKB MZ070782 LKT3 NT01444 NT01445
MF382100 MF382080 MF382081 LT795513 MF382101 LT629260 LT629261 LT795526 MF382082 MF382083 MF382084 MF382085 MF382086 MF382090 LT629259 LT883522 MF382087 MF382088 MF382104 MF382089 MF417564 LT795515 LT629253 LT795525 MF382092 MF382093
Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Steven GE Marsh, London, United Kingdom Carolyn K Hurley, Washington DC, USA Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Steven GE Marsh, London, United Kingdom Sarah Colom, La Tronche, France Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA (continued on next page)
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Human Immunology 78 (2017) 758–761
S.G.E. Marsh Table 2 (continued) HLA Allele
Cell identification
Accession number
Submitting author
A*24:116 A*24:148 A*26:09 A*26:10 A*29:04 A*29:10:01 A*29:37 A*30:70N A*68:20 B*08:173 B*15:08:01 B*15:19 B*15:20 B*15:106 B*27:09 B*35:05:01:02 B*39:08 B*40:04 B*44:12 B*47:01:01:03 B*52:01:01:02 B*82:01 C*03:14 C*07:02:01:03 C*16:111 DRB1*01:66 DRB1*01:77 DRB1*14:13 DQB1*03:01:01:07 DQB1*03:02:01:04 DQB1*03:231
NT01455 NT01456 NT01446 NT01447 NT01448 NT01451 NT01449 NT01450 NT01452 016343093 KHAGNI GEE018 OLL 4140313022 FH05 GRC212 CB GRC212EC MOV002AN PLH AKIBA FH08 4170629013 SAVC 016351240 44321 016329996 GRC-138 T067 BY01499, BY01500 AN00061
MF382102 MF382103 MF382094 MF382095 MF382096 MF382098 MF382097 MF417565 MF382099 LT883525 LT795524 LT629257 LT795528 KR019012 LT795519 LT795520 LT795514 LT795521 LT795527 LT795529 LT795512 LT795518 MF498776 LT795531 LT883528 MF358697 LT883529 KX687279 LC257858 MF417567, MF417569 LT575652
Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Carolyn K Hurley, Washington DC, USA Sarah Colom, La Tronche, France Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Talitha de Hoop, Utrecht, The Netherlands Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Steven GE Marsh, London, United Kingdom Talitha de Hoop, Utrecht, The Netherlands Steven GE Marsh, London, United Kingdom Sarah Colom, La Tronche, France Francisco de Paula Sanchez Gordo, Malaga, Spain Sarah Colom, La Tronche, France Konstantinos Barsakis, Palo Alto, USA Takashi Shiina, Isehara, Japan Carolyn K Hurley, Washington DC, USA Steven GE Marsh, London, United Kingdom
Table 3 Recently published sequences. HLA Allele
References
A*02:505 A*02:683 A*03:275N A*11:229 A*32:95 B*08:177 B*27:147 B*39:119 B*40:01:41 B*40:242 B*40:247 B*41:50 B*44:02:45 B*44:03:02 B*48:03:01 B*48:04:01 G*01:01:01:07 DRB1*01:01:30 DRB1*15:127 DQA1*01:15N DQB1*02:85 DQB1*06:210
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